FMO03752.5prime Sequence
990 bp (990 high quality bases) assembled on 2008-07-21
> FMO03752.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATGTATCA
ATTCCGGTGCTATTTGTGGCCCTCATCTGTCTGGCAGCTGCGTCGGCGTT
TCCTCAACTGAGGCAGCGCAACGAGAAGCAGGTTCAAACCGGCGATGATG
ATTTGCCTTCCAAGGGCGCCACTATCGAGGAAGTAGTGGTGGAATCAGCC
TTGTACATCAAACCGAAGTCTAATCCGCAGGTGCGTCGCGTCCGTTCGGT
CCTGGATCAAATATCCGGAATCCAGGCCGCTCACAAGAGGGTGAAGCGTC
AGTTTGGGCGACAATTTGGTGGTCAGTATGCTGGAAATCCCGGCTTCGGT
GGCGGATTCGGTGGAGAGCCTGGTTTTGGAGGTGGATTCGGCGGTAATCA
AGGATTTGGAGGCAACCAGGGATTCGGAGGTAATCAGGGTTTCGGCGGTA
ATCAGGAATTCGGCGGTAACCCAGGATTCGGAGGAAATCCCGGATTCGGC
GGTAATCAAGGTGGAAAAGTTCAGGCAGGTACATCGGCCGGCGCTGGGGG
AACCAAAGCGGGTGTTGATGTTGGTGCCGGACCAGATGGCGGCAATGCCA
ATGCCAACGTCGAGTTAAATCCGCTGGGACCACTCGGACCCAGTGGTTAC
AACCAGGAGCAGGCCGCATCCAACGGAGCTGCCCACAGCAACTACAACAA
TGGACTCAACTCAGGATCCTCGGCCGCCAGTGGGCAGGCTCAGGGGCTTC
CAGTCGCAGAGTGCCAATGGATCATTCGGTGCCTCCTCCGCAAGCACGGC
CACTCAGTCCCAGAACACCAGCCCCTTTGGATCCAATAATGCGGCAGGTG
CTTCGCTGAGTCAGTTTACCATCTTCCCAATGGACAGACAATAAACTTTA
GCTCCACGAACAGCTTCGCTATGGAGGAGCCAATCGTGCAGTAGCCATGG
ATCGGCAGTTTCTGTCAGGCCGCGCAGCTTTCTAGACCAT
FMO03752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17032-RB | 1127 | CG17032-RB | 84..1019 | 35..968 | 4570 | 99.5 | Plus |
| CG17032-RA | 1463 | CG17032-RA | 420..1355 | 35..968 | 4570 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15959688..15960501 | 157..968 | 3875 | 99.5 | Plus |
| 3L | 28110227 | 3L | 15959262..15959383 | 35..156 | 595 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:22:35 has no hits.
FMO03752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:36 Download gff for
FMO03752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17032-RA | 418..1359 | 31..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:04 Download gff for
FMO03752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17032-RA | 418..1359 | 31..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:42 Download gff for
FMO03752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17032-RA | 418..1359 | 31..973 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:42 Download gff for
FMO03752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15959260..15959383 | 31..156 | 97 | -> | Plus |
| 3L | 15959688..15960505 | 157..973 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:36 Download gff for
FMO03752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15952360..15952483 | 31..156 | 97 | -> | Plus |
| arm_3L | 15952788..15953605 | 157..973 | 99 | | Plus |
