FMO03753.5prime Sequence
979 bp (979 high quality bases) assembled on 2008-07-21
> FMO03753.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTAAGCTAA
CGATGCTGATGGGCCTGGCCCTCATCCTGGCCCCATCAACGATCCAGGCC
AAGTCCCTGTGCCGCAGCAGCGGCTACTTCGCCCTAGTGGATAACACACC
CGACTTCTATGCCTGCCAGTCAACCGCCTACGGTGGCTACTCTCTGCGCT
TCCTGCGCTGCCCCGCTGGTCTGGTCTTCAGCTCCTCGATGGCCCAGTGC
GTTCAGTCCATTGCCGCTTTCGAGGCTCGTGATGATAGCAACATCGAGAA
CCCTACCATTCCGCCGAGCAACCTGGATGAGAGCACCACTGAGAAACCAG
CCACTGAGGCACCTGGCACAACCGAGAAAGTAACCACTGCGGCACCTGGC
ACCACTGAGAAAGTAACCACTGAGGCACCTGGCACCACTGAGAAAATAAC
CACTGAGGCACCTGGAACCACCGAGAAAATAACCACTGAGGCACCTGGAA
CCACCGAGAAAATAACCACTGAGGCACCTGGAACCACCGAGAAAATAACC
ACTGAGGCTCCTGGAACCACTGAAAAGCCCGCCACCGATGCTCCCGGCAC
CACCGAAAAACCAGCCACGGATGCACCTGGAACCACTGAGAAATCAGAAA
CTACTGATGCTCCCGGCACCACGGATAAATCAGATACTGATGCTCCCATT
ACCGACGAGCCGTCAACCGCTGAGACCAGTACCGATGAGCCCAACACCGA
GACCACTGAAAGCGGCGAAGAGACCACCATCGAGGACAATGTGTGCGCCA
CCACCGGACTATTCCCGACGGGCAGCTGCACGCACTTCATCGTCTGCAGC
TACGCCGAAGGGGACGAGCTGAAGGCCTACACGAAGAAGTGTCCTGGCGA
GATGCAGTTCGATCCCTTCAACAGCGTTTGCTCAGCGTCTTACGACTGCA
CTGCAGGAAACGCAAGCTTTCTAGACCAT
FMO03753.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Muc18B-RB | 1146 | CG7876-RB | 45..972 | 34..961 | 4625 | 99.9 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 45..972 | 34..961 | 4625 | 99.9 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..675 | 366..697 | 950 | 86 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 377..708 | 333..664 | 950 | 86 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..675 | 366..697 | 950 | 86 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 377..708 | 333..664 | 950 | 86 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..635 | 399..693 | 760 | 84.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 410..704 | 333..624 | 760 | 84.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..635 | 399..693 | 760 | 84.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 410..704 | 333..624 | 760 | 84.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..606 | 432..697 | 590 | 82 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 443..708 | 333..595 | 590 | 82 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..606 | 432..697 | 590 | 82 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 443..708 | 333..595 | 590 | 82 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 346..522 | 467..643 | 420 | 82.5 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 478..654 | 335..511 | 420 | 82.5 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 346..522 | 467..643 | 420 | 82.5 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 478..654 | 335..511 | 420 | 82.5 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 346..489 | 500..643 | 300 | 81.4 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 511..654 | 335..478 | 300 | 81.4 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 346..489 | 500..643 | 300 | 81.4 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 511..654 | 335..478 | 300 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19215559..19216486 | 34..961 | 4625 | 99.9 | Plus |
X | 23542271 | X | 19215858..19216177 | 366..688 | 905 | 86.1 | Plus |
X | 23542271 | X | 19215891..19216213 | 333..652 | 905 | 86.1 | Plus |
X | 23542271 | X | 19215858..19216149 | 399..693 | 735 | 84.1 | Plus |
X | 23542271 | X | 19215924..19216218 | 333..624 | 735 | 84.1 | Plus |
X | 23542271 | X | 19215858..19216069 | 432..643 | 580 | 84.9 | Plus |
X | 23542271 | X | 19215957..19216168 | 333..544 | 580 | 84.9 | Plus |
X | 23542271 | X | 19215860..19216036 | 467..643 | 420 | 82.5 | Plus |
X | 23542271 | X | 19215992..19216168 | 335..511 | 420 | 82.5 | Plus |
X | 23542271 | X | 19215860..19216003 | 500..643 | 300 | 80.6 | Plus |
X | 23542271 | X | 19216025..19216168 | 335..478 | 300 | 80.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:57 has no hits.
FMO03753.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:25 Download gff for
FMO03753.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Muc18B-RA | 41..978 | 30..970 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:21 Download gff for
FMO03753.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7876-RA | 39..976 | 30..970 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:41 Download gff for
FMO03753.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Muc18B-RA | 41..978 | 30..970 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:41 Download gff for
FMO03753.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19215555..19216492 | 30..970 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:25 Download gff for
FMO03753.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19109588..19110525 | 30..970 | 99 | | Plus |