Clone FMO03753 Report

Search the DGRC for FMO03753

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:53
Vector:pMK33-CFH-BD
Associated Gene/TranscriptMuc18B-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03753.5prime Sequence

979 bp (979 high quality bases) assembled on 2008-07-21

> FMO03753.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTAAGCTAA
CGATGCTGATGGGCCTGGCCCTCATCCTGGCCCCATCAACGATCCAGGCC
AAGTCCCTGTGCCGCAGCAGCGGCTACTTCGCCCTAGTGGATAACACACC
CGACTTCTATGCCTGCCAGTCAACCGCCTACGGTGGCTACTCTCTGCGCT
TCCTGCGCTGCCCCGCTGGTCTGGTCTTCAGCTCCTCGATGGCCCAGTGC
GTTCAGTCCATTGCCGCTTTCGAGGCTCGTGATGATAGCAACATCGAGAA
CCCTACCATTCCGCCGAGCAACCTGGATGAGAGCACCACTGAGAAACCAG
CCACTGAGGCACCTGGCACAACCGAGAAAGTAACCACTGCGGCACCTGGC
ACCACTGAGAAAGTAACCACTGAGGCACCTGGCACCACTGAGAAAATAAC
CACTGAGGCACCTGGAACCACCGAGAAAATAACCACTGAGGCACCTGGAA
CCACCGAGAAAATAACCACTGAGGCACCTGGAACCACCGAGAAAATAACC
ACTGAGGCTCCTGGAACCACTGAAAAGCCCGCCACCGATGCTCCCGGCAC
CACCGAAAAACCAGCCACGGATGCACCTGGAACCACTGAGAAATCAGAAA
CTACTGATGCTCCCGGCACCACGGATAAATCAGATACTGATGCTCCCATT
ACCGACGAGCCGTCAACCGCTGAGACCAGTACCGATGAGCCCAACACCGA
GACCACTGAAAGCGGCGAAGAGACCACCATCGAGGACAATGTGTGCGCCA
CCACCGGACTATTCCCGACGGGCAGCTGCACGCACTTCATCGTCTGCAGC
TACGCCGAAGGGGACGAGCTGAAGGCCTACACGAAGAAGTGTCCTGGCGA
GATGCAGTTCGATCCCTTCAACAGCGTTTGCTCAGCGTCTTACGACTGCA
CTGCAGGAAACGCAAGCTTTCTAGACCAT

FMO03753.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
Muc18B-RB 1146 CG7876-RB 45..972 34..961 4625 99.9 Plus
Muc18B-RA 1068 CG7876-RA 45..972 34..961 4625 99.9 Plus
Muc18B-RB 1146 CG7876-RB 344..675 366..697 950 86 Plus
Muc18B-RB 1146 CG7876-RB 377..708 333..664 950 86 Plus
Muc18B-RA 1068 CG7876-RA 344..675 366..697 950 86 Plus
Muc18B-RA 1068 CG7876-RA 377..708 333..664 950 86 Plus
Muc18B-RB 1146 CG7876-RB 344..635 399..693 760 84.1 Plus
Muc18B-RB 1146 CG7876-RB 410..704 333..624 760 84.1 Plus
Muc18B-RA 1068 CG7876-RA 344..635 399..693 760 84.1 Plus
Muc18B-RA 1068 CG7876-RA 410..704 333..624 760 84.1 Plus
Muc18B-RB 1146 CG7876-RB 344..606 432..697 590 82 Plus
Muc18B-RB 1146 CG7876-RB 443..708 333..595 590 82 Plus
Muc18B-RA 1068 CG7876-RA 344..606 432..697 590 82 Plus
Muc18B-RA 1068 CG7876-RA 443..708 333..595 590 82 Plus
Muc18B-RB 1146 CG7876-RB 346..522 467..643 420 82.5 Plus
Muc18B-RB 1146 CG7876-RB 478..654 335..511 420 82.5 Plus
Muc18B-RA 1068 CG7876-RA 346..522 467..643 420 82.5 Plus
Muc18B-RA 1068 CG7876-RA 478..654 335..511 420 82.5 Plus
Muc18B-RB 1146 CG7876-RB 346..489 500..643 300 81.4 Plus
Muc18B-RB 1146 CG7876-RB 511..654 335..478 300 81.4 Plus
Muc18B-RA 1068 CG7876-RA 346..489 500..643 300 81.4 Plus
Muc18B-RA 1068 CG7876-RA 511..654 335..478 300 81.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19215559..19216486 34..961 4625 99.9 Plus
X 23542271 X 19215858..19216177 366..688 905 86.1 Plus
X 23542271 X 19215891..19216213 333..652 905 86.1 Plus
X 23542271 X 19215858..19216149 399..693 735 84.1 Plus
X 23542271 X 19215924..19216218 333..624 735 84.1 Plus
X 23542271 X 19215858..19216069 432..643 580 84.9 Plus
X 23542271 X 19215957..19216168 333..544 580 84.9 Plus
X 23542271 X 19215860..19216036 467..643 420 82.5 Plus
X 23542271 X 19215992..19216168 335..511 420 82.5 Plus
X 23542271 X 19215860..19216003 500..643 300 80.6 Plus
X 23542271 X 19216025..19216168 335..478 300 80.6 Plus
Blast to na_te.dros performed on 2014-11-28 20:02:57 has no hits.

FMO03753.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:25 Download gff for FMO03753.5prime
Subject Subject Range Query Range Percent Splice Strand
Muc18B-RA 41..978 30..970 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:21 Download gff for FMO03753.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7876-RA 39..976 30..970 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:41 Download gff for FMO03753.5prime
Subject Subject Range Query Range Percent Splice Strand
Muc18B-RA 41..978 30..970 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:41 Download gff for FMO03753.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19215555..19216492 30..970 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:25 Download gff for FMO03753.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19109588..19110525 30..970 99   Plus