Clone FMO03756 Report

Search the DGRC for FMO03756

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:56
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11151-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03756.5prime Sequence

399 bp (399 high quality bases) assembled on 2008-07-21

> FMO03756.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTCTGCAGTC
GGACGCCGTTTTCCAAAAGATCATCGATGGACTGAAGGAGAACGAGGCCA
AGGCCAAGGCGGTCAACGGTGTGTTCCTGTACAAAATCACCAAGGACGGC
AAGGTGGCCAAGGAGTGGACTCTGGACTGCAAGAACGCCAAGGCCTACGA
GGGACCTGCCCAGGGCATCAAGGTGGACACCACCTTGACGGTCGCCGACG
AGGACATGGTTGACATCGCCCTGGGCAAGCTGAACCCCCAGGCTGCCTTC
ATGAAGGGCAAGCTGAAGATCGCCGGCAACATCATGCTCACCCAGAAGCT
GGCGCCGCTCCTGAAGACCGACGCCAAGTTGGCAAGCTTTCTAGACCAT

FMO03756.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG11151-RB 1066 CG11151-RB 198..543 36..381 1730 100 Plus
CG11151-RA 705 CG11151-RA 148..493 36..381 1730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13740678..13740889 170..381 1060 100 Plus
X 23542271 X 13739979..13740112 36..169 670 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:24:22 has no hits.

FMO03756.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:54 Download gff for FMO03756.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11151-RA 141..496 29..385 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:36 Download gff for FMO03756.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11151-RA 141..496 29..385 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:07 Download gff for FMO03756.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11151-RA 141..496 29..385 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:07 Download gff for FMO03756.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13739972..13740112 29..169 97 -> Plus
X 13740678..13740892 170..385 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:54 Download gff for FMO03756.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13634005..13634145 29..169 97 -> Plus
arm_X 13634711..13634925 170..385 99   Plus