FMO03757.5prime Sequence
607 bp (607 high quality bases) assembled on 2008-07-21
> FMO03757.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGTGAGTACA
AAATCGTGGTCCTTGGAAGCGGCGGCGTGGGCAAATCCGCGCTGACAGTC
CAGTTTGTCCAGTGCATCTTCGTGGAGAAGTACGATCCCACCATCGAGGA
CAGTTACAGGAAGCAGGTGGAGGTGGACGGACAGCAGTGCATGCTGGAGA
TCCTGGACACGGCGGGTACGGAGCAGTTCACGGCCATGCGGGATTTGTAC
ATGAAGAACGGCCAGGGATTCGTGCTGGTCTACTCGATCACGGCGCAATC
GACGTTTAACGATCTGCAGGACCTGCGCGAGCAGATACTCCGGGTGAAGG
ACACGGACGATGTGCCCATGGTGCTCGTGGGCAACAAGTGCGACCTCGAA
GAGGAGCGCGTCGTCGGCAAGGAGCTGGGCAAGAACCTGGCCACCCAGTT
CAACTGCGCCTTCATGGAGACCTCAGCCAAAGCCAAAGTGAATGTGAACG
ATATTTTCTACGACCTGGTCCGGCAGATCAACAAGAAGTCGCCCGAGAAG
AAACAGAAGAAGCCGAAAAAGTCCCTATGTGTTCTGCTAGCAAGCTTTCT
AGACCAT
FMO03757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R-RC | 2702 | CG1956-RC | 605..1157 | 37..589 | 2765 | 100 | Plus |
| R-RB | 2872 | CG1956-RB | 775..1327 | 37..589 | 2765 | 100 | Plus |
| R-RA | 2741 | CG1956-RA | 644..1196 | 37..589 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1860660..1861212 | 589..37 | 2765 | 100 | Minus |
| 3R | 32079331 | 3R | 9512159..9512282 | 170..47 | 200 | 77.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:03 has no hits.
FMO03757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:09 Download gff for
FMO03757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| R-RA | 637..1204 | 30..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:25 Download gff for
FMO03757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| R-RA | 632..1199 | 30..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:22 Download gff for
FMO03757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| R-RA | 637..1204 | 30..597 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:22 Download gff for
FMO03757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1860652..1861219 | 30..597 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:09 Download gff for
FMO03757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1860652..1861219 | 30..597 | 98 | | Minus |
