FMO03762.5prime Sequence
1211 bp (1056 high quality bases) assembled on 2008-07-21
> FMO03762.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGACGCAAAAAAC
TATGTTGCTGCAGTTGCTGCTCCTTGTGGCAGCCGTAGCAGCCAGCTTGG
CCAACGAGTTGCCCTCCAATCTCACACTGCTGGATGCCAACGAGATACCG
CAACGGTACGATGAGGCGCAGCTCTGGAGGATCTACAACATCTCGGAGGC
GATGCAAAAGCGTGTGCCCGTGGGCCAAATGCTGGAGCAGAAGTTCGGTG
GCAATATCTGGAAGGAGAACTCCAAGTTTCTGGACATCTCCATTGCCAGG
GATCAACTGAAGGCCGCCCGCAGCTTTCTATCCGCCCATCGTCTGGATCC
CCAGATTCTCTCCCACAACATTCAATCCATGATCGACGAGGAGCTTCTCG
AAGGCATTCAGTCCAGTTCGTTTGGTCACGGAAGGAGAACGAAAAAGGCC
GCCAGGAGCAGCATGCACTGGAAGGACTATCACGATCTGGAGACCATCTA
TAGCTTTATGCGGGAGATCCGCACCAAATTCCCCAACATCGTGCGACTAT
ACACCATTGGCCAAACGGCCGAGGGACGCGATCTGAAAGTGCTTAGAATC
TCGGAGAATCCCCGCGAGAACAAGAAGGTGTGGATCGACGGCGGCATCCA
CGCCCGCGAATGGATCAGCCCCGCGACGGTGACCTTCATCCTGTACCAGC
TGATGTCCGACTGGGAGAACCAGCCGGCGCACATTCGCGGCCTCACCTGG
TACATAATGCCAGTGATGAATCCCGATGGCTACGAGTACAGTCGAACAAC
GAATCGCCTGTGGCGCAAGAATCGCTCGCCATCGCGTCGCGCCCAGTGCA
GCGGTGTGGATCTCAACCGTAACTTCGACATCGGCTGGAATGGCTATGGC
TCGTCGACGAATCCGTGCAGTGATACGTACCGCGGATCCGCGCCAGCTTC
GGAGCGGGAAACGCGAGCGGTGGCCGAGTTTTGGCCAAGCGGAGTACATC
TGGAATCGTATTTGACTTTCACAGCTACGACAGATGATTGTTTATTCGTG
GGCCTACCAGCGTCAAGTTCAAGGATGCCAGTGTCCTGCAGCGGAGTGAC
AAGTTTGCGCGGAGCGATCCTCAGAGACCGTCCTCGTCGGGCAACGGTAC
CTGAAGTTTGAATCCAGCGGTGATCAGAACTGGGAGCGCGCCCGCGCCTG
TGGTCTAATAA
FMO03762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3097-RA | 1983 | CG3097-RA | 410..1504 | 37..1122 | 5135 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5766365..5766871 | 1093..594 | 2160 | 97.8 | Minus |
| X | 23542271 | X | 5767289..5767694 | 442..37 | 2030 | 100 | Minus |
| X | 23542271 | X | 5767074..5767227 | 596..443 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:41 has no hits.
FMO03762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:58 Download gff for
FMO03762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3097-RA | 405..1498 | 33..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:24 Download gff for
FMO03762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3097-RA | 404..1497 | 33..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:22 Download gff for
FMO03762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3097-RA | 405..1498 | 33..1117 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:22 Download gff for
FMO03762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5766352..5766868 | 597..1107 | 97 | <- | Minus |
| X | 5767074..5767227 | 443..596 | 100 | <- | Minus |
| X | 5767289..5767699 | 33..442 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:58 Download gff for
FMO03762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5660385..5660901 | 597..1107 | 97 | <- | Minus |
| arm_X | 5661107..5661260 | 443..596 | 100 | <- | Minus |
| arm_X | 5661322..5661732 | 33..442 | 99 | | Minus |
