Clone FMO03768 Report

Search the DGRC for FMO03768

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:68
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31715-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03768.5prime Sequence

416 bp (416 high quality bases) assembled on 2008-07-21

> FMO03768.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCCACATGAGTGCGATTTCT
AATGAAGACATTATTTGGACCATAAAGAACGGAGAGTTCGATGCTGTGCA
AGACGCTTTTCAGAATGATGCACAAAAGGTGAATGAGGAAATCAAGGGCC
GTTTTCCAGTACACTATGCAGCAGATTTTGGACAACTGAATGTCCTGGAG
TTTCTTATAAGCTTAGGAGCAGACATAAATAGAAAGGACAAACATGGTAT
TACCCCCATTCTGGCTGCCATTTGGGAAGGACATACGAGCTGTGTGGAAT
TACTTCTAAAAATGGGAGCTGATAAAAATGGTTCTACTCCAGATGGCCAA
AGCTACCTCGAGGCGGCGGAAAAAGACGAGATTAAGAAACTCCTTGCAGC
AAGCTTTCTAGACCAT

FMO03768.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31715-RA 580 CG31715-RA 67..429 36..398 1815 100 Plus
CG31715-RB 574 CG31715-RB 67..423 36..398 1715 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10341822..10341932 120..230 555 100 Plus
2L 23513712 2L 10342150..10342234 231..315 425 100 Plus
2L 23513712 2L 10342288..10342372 314..398 425 100 Plus
2L 23513712 2L 10341682..10341766 36..120 425 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:25 has no hits.

FMO03768.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:21 Download gff for FMO03768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31715-RA 67..432 36..402 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:28 Download gff for FMO03768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31715-RA 62..427 36..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:40 Download gff for FMO03768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31715-RA 67..432 36..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:40 Download gff for FMO03768.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10342150..10342233 231..314 100 -> Plus
2L 10342289..10342375 315..402 97   Plus
2L 10341682..10341765 36..119 100 -> Plus
2L 10341822..10341932 120..230 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:21 Download gff for FMO03768.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10341682..10341765 36..119 100 -> Plus
arm_2L 10341822..10341932 120..230 100 -> Plus
arm_2L 10342150..10342233 231..314 100 -> Plus
arm_2L 10342289..10342375 315..402 97   Plus