FMO03768.5prime Sequence
416 bp (416 high quality bases) assembled on 2008-07-21
> FMO03768.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCCACATGAGTGCGATTTCT
AATGAAGACATTATTTGGACCATAAAGAACGGAGAGTTCGATGCTGTGCA
AGACGCTTTTCAGAATGATGCACAAAAGGTGAATGAGGAAATCAAGGGCC
GTTTTCCAGTACACTATGCAGCAGATTTTGGACAACTGAATGTCCTGGAG
TTTCTTATAAGCTTAGGAGCAGACATAAATAGAAAGGACAAACATGGTAT
TACCCCCATTCTGGCTGCCATTTGGGAAGGACATACGAGCTGTGTGGAAT
TACTTCTAAAAATGGGAGCTGATAAAAATGGTTCTACTCCAGATGGCCAA
AGCTACCTCGAGGCGGCGGAAAAAGACGAGATTAAGAAACTCCTTGCAGC
AAGCTTTCTAGACCAT
FMO03768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31715-RA | 580 | CG31715-RA | 67..429 | 36..398 | 1815 | 100 | Plus |
CG31715-RB | 574 | CG31715-RB | 67..423 | 36..398 | 1715 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10341822..10341932 | 120..230 | 555 | 100 | Plus |
2L | 23513712 | 2L | 10342150..10342234 | 231..315 | 425 | 100 | Plus |
2L | 23513712 | 2L | 10342288..10342372 | 314..398 | 425 | 100 | Plus |
2L | 23513712 | 2L | 10341682..10341766 | 36..120 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:25 has no hits.
FMO03768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:21 Download gff for
FMO03768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31715-RA | 67..432 | 36..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:28 Download gff for
FMO03768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31715-RA | 62..427 | 36..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:40 Download gff for
FMO03768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31715-RA | 67..432 | 36..402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:40 Download gff for
FMO03768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10342150..10342233 | 231..314 | 100 | -> | Plus |
2L | 10342289..10342375 | 315..402 | 97 | | Plus |
2L | 10341682..10341765 | 36..119 | 100 | -> | Plus |
2L | 10341822..10341932 | 120..230 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:21 Download gff for
FMO03768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10341682..10341765 | 36..119 | 100 | -> | Plus |
arm_2L | 10341822..10341932 | 120..230 | 100 | -> | Plus |
arm_2L | 10342150..10342233 | 231..314 | 100 | -> | Plus |
arm_2L | 10342289..10342375 | 315..402 | 97 | | Plus |