FMO03769.5prime Sequence
430 bp (430 high quality bases) assembled on 2008-07-21
> FMO03769.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGACCGCTT
CGCGAGTGACTTTGGGACTGGCGGTCTCCATTTCCACAGCGATCATAGGT
TATGTGCACTATAAACAATCGGCAGACCGCCTGAGACTGCACGATGGTGT
CCTGAGGGACGTTGAGCAGCAACAACGGCGCAAACACGAGAATACCTACA
CGCTGCAGCAGCAAATAGACATGACCAAGCAACTGAAAGCCAGGGAGGCG
TCTAGCAACTCCTCTGACACGCCCGTACCTCCATCGACGCATCGCGCACA
GAGTAATCTTCAAGCGGAGAAGCCAGCAGTGCAAAATGAAGGCGAGGCTT
TCAGAGGTGTTCCTCAGGGTGGAACGACTAATCACGATGGAAGCCCGCCA
ACTGACATAGCTGCAAGCTTTCTAGACCAT
FMO03769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11562-RA | 748 | CG11562-RA | 150..525 | 37..412 | 1880 | 100 | Plus |
| U2af38-RB | 1655 | CG3582-RB | 1615..1655 | 412..372 | 205 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 292716..292999 | 129..412 | 1420 | 100 | Plus |
| 2L | 23513712 | 2L | 292568..292660 | 37..129 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:17 has no hits.
FMO03769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:26 Download gff for
FMO03769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11562-RA | 146..525 | 30..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:49 Download gff for
FMO03769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11562-RA | 99..478 | 30..412 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:30 Download gff for
FMO03769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11562-RA | 146..525 | 30..412 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:30 Download gff for
FMO03769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 292563..292660 | 30..129 | 96 | -> | Plus |
| 2L | 292717..292999 | 130..412 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:26 Download gff for
FMO03769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 292563..292660 | 30..129 | 96 | -> | Plus |
| arm_2L | 292717..292999 | 130..412 | 100 | | Plus |
