FMO03770.5prime Sequence
527 bp (527 high quality bases) assembled on 2008-07-21
> FMO03770.5prime
TAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGAGC
CAAACTTTGACCCTTTGCTGCCTTGCATTGGTGGCATGTGTATACGGAAA
TACAGTGTCCACCAACGATACCGCTTGTCCAACTTTTTGCCCCAGTATCT
ACAAGCCAGTATGCGGAACTGATGGCCAGAACTTCAAGGAGTTTGCTAGC
ACCTGCAATCTTTTGTCCCACAACTGTCGCCGCGAAAGGAATAGCGTGCA
GGCCTATGCTGCCACCGATGCCGCCTGGTGCAGCTCCGAGTTCGTCGAGA
ATCTGCACGAGAAGTTGGGCAACTTCAAGCTGGAGGTCAAGGAATGCTTC
AAGCCCTGCTCGATGATCTACCAGCCGGTGTGCATTACCAATGGAAAGTA
TCGTGCCGAGTTGGCCAACTCCTGCCTGCTGGAGAACTTCAACTGCGCCC
TGCAGGTCTCCGGCGCCCAACCCGCTGAGCTCTTCCGTCTTTTGCGCGAA
GAGAAATGCGCAAGCTTTCTAGACCAT
FMO03770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kaz-m1-RB | 1705 | CG8342-RB | 96..563 | 42..509 | 2340 | 100 | Plus |
| Kaz-m1-RA | 670 | CG8342-RA | 96..563 | 42..509 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26015088..26015345 | 252..509 | 1290 | 100 | Plus |
| 3R | 32079331 | 3R | 26014816..26015026 | 42..252 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:22:13 has no hits.
FMO03770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:32 Download gff for
FMO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kaz-m1-RA | 88..560 | 37..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:21 Download gff for
FMO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| m1-RA | 87..559 | 37..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:35 Download gff for
FMO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kaz-m1-RA | 91..563 | 37..509 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:35 Download gff for
FMO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26014807..26015026 | 32..252 | 97 | <- | Plus |
| 3R | 26015089..26015344 | 253..508 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:32 Download gff for
FMO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21840529..21840748 | 32..252 | 97 | <- | Plus |
| arm_3R | 21840811..21841066 | 253..508 | 100 | <- | Plus |
