FMO03775.5prime Sequence
524 bp (524 high quality bases) assembled on 2008-07-21
> FMO03775.5prime
CTTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGACTAATTAT
TCGGAAATTTTTAAGAAAGTTTTTAACGATATTGGCCAACGTTCAGCATA
TTCGCAGATGCTTATTGGCGTTTCATCAGGATGGGTCACAGGATATACGA
CAATGAAAATAGGCAAATTTGCTGCCTTTGCAGTTGGCGGCAGCATAATC
TTGCTCGAAATCGCCCACCAAGAAGGACTTATAAAAATAAATTGGTCTAA
GTTGGATAAGAGCGTGGATAAGCTCGCCGATAAAGTGGAAGCCTCGCTGG
GTCGTGAGAAGAACTGGAAGGATAAGACCGAAAGATATGTCGACAATCAA
TTAGACAGAGCTGAAAGCCTCCTAACCCGAAACGGCAAGAAAGTGGCGAA
ATGGTACACCAAACTGATTGGCGATGAAGAGGGTCCAAAAGTCAACGATC
TGCACATATTTTTGGCATCATTTTTCGGTGGCGTTGCCCTGGGCATTGCT
ACTGGAGCAAGCTTTCTAGACCAT
FMO03775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5676-RA | 769 | CG5676-RA | 77..544 | 39..506 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10255078..10255271 | 326..133 | 970 | 100 | Minus |
| 2L | 23513712 | 2L | 10254835..10255016 | 506..325 | 910 | 100 | Minus |
| 2L | 23513712 | 2L | 10255720..10255815 | 134..39 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:30:06 has no hits.
FMO03775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:45 Download gff for
FMO03775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5676-RA | 77..547 | 39..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:56 Download gff for
FMO03775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5676-RA | 70..540 | 39..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:39 Download gff for
FMO03775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5676-RA | 77..547 | 39..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:39 Download gff for
FMO03775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10254831..10255014 | 327..510 | 98 | <- | Minus |
| 2L | 10255078..10255270 | 134..326 | 100 | <- | Minus |
| 2L | 10255721..10255815 | 39..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:45 Download gff for
FMO03775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10255078..10255270 | 134..326 | 100 | <- | Minus |
| arm_2L | 10255721..10255815 | 39..133 | 100 | | Minus |
| arm_2L | 10254831..10255014 | 327..510 | 98 | <- | Minus |
