FMO03776.5prime Sequence
472 bp (472 high quality bases) assembled on 2008-07-21
> FMO03776.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACTCCTACT
TCGTGATCGCTTTGAGTGCTCTTTTTGTGACTCTGGCTGTTGGATCGTCC
CTTAATCTGAGCGACGAGCAGAAGGATCTGGCCAAGCAGCATCGTGAGCA
GTGCGCCGAGGAAGTGAAACTTACCGAGGAGGAAAAGGCCAAGGTCAATG
CCAAGGACTTCAATAACCCCACCGAGAACATCAAGTGCTTTGCCAACTGC
TTCTTCGAGAAGGTCGGAACCCTGAAGGACGGTGAGCTGCAGGAGTCAGT
GGTGCTGGAGAAGCTCGGCGCTCTCATTGGCGAGGAGAAGACCAAGGCGG
CTCTGGAGAAGTGCAGGACCATCAAGGGCGAGAACAAGTGTGATACCGCC
TCCAAGTTGTACGATTGCTTCGAGAGCTTCAAGCCCGCCCCCGAGGCTAA
GGCCGCAAGCTTTCTAGACCAT
FMO03776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56a-RA | 547 | CG11797-RA | 46..464 | 36..454 | 2095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19698068..19698425 | 97..454 | 1790 | 100 | Plus |
| 2R | 25286936 | 2R | 19697768..19697829 | 36..97 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:29 has no hits.
FMO03776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:07 Download gff for
FMO03776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56a-RA | 34..469 | 23..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:21 Download gff for
FMO03776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56a-RA | 34..469 | 23..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:06 Download gff for
FMO03776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56a-RA | 34..469 | 23..459 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:06 Download gff for
FMO03776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19697759..19697829 | 27..97 | 94 | -> | Plus |
| 2R | 19698069..19698430 | 98..459 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:07 Download gff for
FMO03776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15585264..15585334 | 27..97 | 94 | -> | Plus |
| arm_2R | 15585574..15585935 | 98..459 | 99 | | Plus |
