FMO03779.5prime Sequence
952 bp (952 high quality bases) assembled on 2008-07-21
> FMO03779.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTAGCAAA
AAGTACAGTGACGTGAATCTTTACGATCTTCTGGGCATTTCTCTCGAGTC
TGATCAAAATGAGATACGCAAGGCGTACCGCAAGAAGGCCCTCGAGTGCC
ATCCCGACAAGAATCCGGACAATCCGAAGGCAGTCGAGCGCTTCCATGAG
TTGTCCAAGGCTCTGGAGATCCTCACGGATGAATCCGCGCGCGCAGCTTA
TGACAAAGTGCTGAAGGCCAAGAAGGCGGCGGAGCTGAGGAGTCGCCAAC
TGGACGGGAAGCGGCAGAAGCTGAAGCTGGAACTGGAGGAACGTGAACGG
GCGGCACTGCACAAACTGGCGAAGAGCCAACCCTACAGCACGGTGGCCAA
AAGCGACGAGGAGGTGCTGCATGAGCAGATCGAGCGGTTGCGACGCGAGG
GCTCCCGTCTGCTGGAGGAGGAGCAGCGAGCCATGCAGGAGCAGTTCCGG
CGGAATCACGCGGAGCAACAGAAACTGCAGCAACAGCCGGTCCAGTTTGA
TTCCGCCCAGCATCGCATCAAGATGAAGTGGAAGGCCGAACCTGGCCAGG
ATTACACACAGCAAGAGCTGCTCAAGTATCTGAAGAAGTACGGCGACGTG
GTGGCCCTGGTGGTCAACAGCAAGCGACGCGGACGCGCCATGGTGGAGCT
GGCCACGCGCGAAGCCTGCGACATGGTCTTGGCCTACGAAAAAGGCGATC
CCGCCAAGCCGCTGCACTTCGAGTGGGTAACGCCGCCGGCGGCAGACAAG
CAGACAACCAAATCGGCCACCACTGGGTGCAGTGCGTCATCCACCGACTA
CGAGGACCTGGTCATGCGAAGCTGCGCCAAGCTGAGGAACGTAAGAGACT
CATTGAGCAGATGATGAAGGACGAGGAGGGCGAAGCAAGCTTTCTAGACC
AT
FMO03779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17187-RA | 1263 | CG17187-RA | 172..1068 | 39..934 | 4460 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11230812..11231708 | 934..39 | 4435 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-28 22:43:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6651..6791 | 394..537 | 110 | 54.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6899 | 459..621 | 110 | 54.2 | Plus |
FMO03779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:27 Download gff for
FMO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 162..1072 | 29..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:23 Download gff for
FMO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 139..1049 | 29..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:50 Download gff for
FMO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 162..1072 | 29..938 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:50 Download gff for
FMO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11230807..11231722 | 26..938 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:27 Download gff for
FMO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7056529..7057444 | 26..938 | 98 | <- | Minus |
