FMO03781.5prime Sequence
687 bp (687 high quality bases) assembled on 2008-07-21
> FMO03781.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTTCCAAATT
CTCCCTGCTCGCCGTGGTTCTCGCTTTTGGCCTGGTTTCTGGCCTCAGCC
TTAGCCTCGTGGTAAAGCCTTCCAAGCTGAAGCTGCCCACCAACAAGAAG
ATCCTTGGCCTTCAGCAGCAAACGGAAGAGCTGGCTGCTCGGGATCCTGG
CACTTCGGTACGCTGCTTCGACTACTACATACCCATCATCAACGGGCTGT
CGGCCCAGTACGAACTGGACTACAATAAGTGCGTTAAGGACTACGACACC
GCCAGCGAACTGGTCCTCGCCGCCTGGAACAGCACTCTCTTCGGCATCCA
GGCTTCCGGGGATCGTGGCTGCAACACCTTCTTCGACTGCTCCTCCATTG
TGGACTTCGTGCTCGCCTTCGAGTGCTTCGCCAACGTCGGAGCTGAGCAA
TCAAAAATCATGTACCAAGTCTCGGCGAATGCCACCGAAGCCGCCGTCCA
GATCAAGATCCATTTGCAGACTTTGGACAGCCAGTTGGAAAGCTGCTTGA
ACTATTCCGAAAAGGATTTCGTGGAGGGCACCTCGCTCTACTATGGAGAA
CTCAACAAATGCCTTGCTGGAGCTCCAGTTCCGCAGGATACCACTGCAAA
TTGGTATTATACCACCGCCGCAAGCTTTCTAGACCAT
FMO03781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7567-RA | 770 | CG7567-RA | 38..671 | 36..669 | 3170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29587664..29588067 | 439..36 | 2020 | 100 | Minus |
| 3R | 32079331 | 3R | 29587336..29587566 | 669..439 | 1155 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:21:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| opus | 7521 | opus OPUS 7521bp | 6757..6794 | 67..32 | 113 | 81.6 | Minus |
FMO03781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:11 Download gff for
FMO03781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7567-RA | 38..674 | 36..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:31 Download gff for
FMO03781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7567-RA | 34..670 | 36..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:02 Download gff for
FMO03781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7567-RA | 38..674 | 36..673 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:02 Download gff for
FMO03781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29587332..29587566 | 439..673 | 99 | <- | Minus |
| 3R | 29587665..29588067 | 36..438 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:11 Download gff for
FMO03781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25413054..25413288 | 439..673 | 99 | <- | Minus |
| arm_3R | 25413387..25413789 | 36..438 | 100 | | Minus |
