FMO03782.5prime Sequence
817 bp (817 high quality bases) assembled on 2008-07-21
> FMO03782.5prime
AACTTCGTATAGCATATATTATACGAAGTTATCAGTCGACATGGAAACTA
ATGTAGATTTCAGCAGCATTTCATCCAAGTTGTACAGAAAGTACGCGCAA
CATGTGAGAAACCTAAAGGACGTGTGCGTATCCAAGACGGTGATGAAACC
GGGGGCCTTCTTTGACAGCCTGCAGCAGATGATGGAGGAGGAGGCAGCAG
CCACTACGCCCCCGAGGGATCTTAGCTCGGTAGCCGACTATGCGGAGCTC
TTCAAGACCTTGGAAGAGTACCCGGCCAACCTGCAGAAAATGCCCAAGAA
GCGGGAGCTACAACGTACCAACTCAACGCTCCTGCGAGGAGCAGACGAGT
CGGTGGCCATGGGCATCAACACATCCAACGTTTCGCTGAGTCTGACGCGT
CTGGAGGAGCAGCGCAGTGCCGTGGACGTGTACAATGATTTTAAGGGTTT
CCAGCGAAAGCTGGCCAAGATCTACGACGAGGCAGCCGCTCTGGACACCA
CAGAATCCATATACAAGCAGAAGCTGACGCAGCTCCATGGATTTGCGCAG
CAGCTGGAAAAGCTCATGCCAACCGGCGGTGAGTCTCCGCCAGATGCTTT
TACATCCGAGCAGCAGGAGAAGCTTCTGACCATAGCCGCCAATATGGAAC
AGCTCAACTACCTGCGCTCCAACAGCCTCCAGCTGCCCAATCCCAATGAG
ATACTCGCCACCGGGAGTCTTGCCGCTCGCCTGGAGATGTTCGTAGAGGT
GCTTACCTATACGCTTCTCCAAGTCAGCAGCTACAATATGGCCATGATTG
CAAGCTTTCTAGACCAT
FMO03782.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msd5-RA | 840 | CG2213-RA | 34..792 | 41..799 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1332355..1333113 | 799..41 | 3795 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:03 has no hits.
FMO03782.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:12 Download gff for
FMO03782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msd5-RA | 26..796 | 33..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:39 Download gff for
FMO03782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2213-RA | 32..802 | 33..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:13 Download gff for
FMO03782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msd5-RA | 26..796 | 33..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:13 Download gff for
FMO03782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1332350..1333112 | 42..803 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:12 Download gff for
FMO03782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1332350..1333112 | 42..803 | 99 | <- | Minus |
