FMO03788.5prime Sequence
555 bp (555 high quality bases) assembled on 2008-07-21
> FMO03788.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGTTGGCTCCCCT
GGGCTTCAGCTGTCCGCGATGCTTGCTCCTGCGACGTGGCGCCGAGCGTT
GGGCCTCACTGGCCCGCCAATTGTCGGGCAGCAGCTCCCAGGATGATGCC
AGCAGCAAGGATGCGGCCGCCCAGGAGGCAGCAAGTGGCTGTCCGCCCAA
TAGCACAACGACGGGCACTGACACTCCCAAAGCCAAAGATAAAACCACCA
AGGGAAGGAAGCGGCTCAGAAACATAGAGATACCTCCCGAGCCCACCACC
TGCTGCATGTCGGGCTGCGCCAACTGCGTTTGGCTGGACTACGCACAGAC
GCTGGCCAAGCTGCTGGGCGACAACGATGAGGAGGCGCGAGAGATTGTGC
TGAGCAAGATCACCGACCCGAACCTGAAGATGTTCCTCAGCCTGGAGCTG
CGCCAGATGGCTAAGCAGCGGGAGGAGAAGGCGGCGGCGGAGAAAGCAGC
GAAGCAGGGAAAGCCAAAGAAATCCTCGCCCCCGCCGGCAAGCTTTCTAG
ACCAT
FMO03788.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5500-RA | 859 | CG5500-RA | 242..742 | 37..537 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26880083..26880342 | 278..537 | 1300 | 100 | Plus |
3R | 32079331 | 3R | 26879594..26879836 | 37..279 | 1215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:37 has no hits.
FMO03788.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:23 Download gff for
FMO03788.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5500-RA | 231..742 | 27..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:08 Download gff for
FMO03788.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5500-RA | 228..739 | 27..537 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:07 Download gff for
FMO03788.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5500-RA | 231..742 | 27..537 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:07 Download gff for
FMO03788.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26879583..26879836 | 27..279 | 98 | -> | Plus |
3R | 26880085..26880342 | 280..537 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:23 Download gff for
FMO03788.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22705305..22705558 | 27..279 | 98 | -> | Plus |
arm_3R | 22705807..22706064 | 280..537 | 100 | | Plus |