FMO03795.5prime Sequence
442 bp (442 high quality bases) assembled on 2008-07-21
> FMO03795.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGCCCCAG
CACCAGCACTCAAGGATCTGCCCAAGGTGGCCGAGAACCTGAAAAGCCAG
TTGGAGGGATTCAACCAGGACAAACTGAAGAACGCTAGCACCCAGGAGAA
GATCATTCTTCCCACCGCCGAAGATGTGGCTGCCGAGAAGACCCAACAGT
CGATCTTCGAGGGCATCACCGCTTTCAATCAGAACAACTTGAAGCACACG
GAGACCAACGAGAAGAACCCGTTGCCCGATAAGGAAGCCATCGAGCAGGA
GAAGGAGAAGAATCAGTTCATCGCCGGCATCGAGAACTTTGATGCGAAAA
AGTTGAAGCACACCGAGACCAATGAGAAGAACGTGCTGCCCACCAAGGAG
GTGATCGAGGCCGAGAAGCAGGCTGCAAGCTTTCTAGACCAT
FMO03795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cib-RE | 911 | CG4944-RE | 177..563 | 38..424 | 1935 | 100 | Plus |
| cib-RD | 1502 | CG4944-RD | 423..809 | 38..424 | 1935 | 100 | Plus |
| cib-RB | 1173 | CG4944-RB | 94..480 | 38..424 | 1935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4110150..4110288 | 286..424 | 695 | 100 | Plus |
| X | 23542271 | X | 4109689..4109824 | 38..173 | 680 | 100 | Plus |
| X | 23542271 | X | 4109895..4110010 | 172..287 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:56:15 has no hits.
FMO03795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:48 Download gff for
FMO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cib-RB | 94..483 | 38..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:03 Download gff for
FMO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cib-RB | 94..483 | 38..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:46 Download gff for
FMO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cib-RB | 94..483 | 38..428 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:46 Download gff for
FMO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4109685..4109824 | 33..173 | 98 | -> | Plus |
| X | 4109897..4110010 | 174..287 | 100 | -> | Plus |
| X | 4110152..4110286 | 288..422 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:48 Download gff for
FMO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4003718..4003857 | 33..173 | 98 | -> | Plus |
| arm_X | 4003930..4004043 | 174..287 | 100 | -> | Plus |
| arm_X | 4004185..4004319 | 288..422 | 100 | -> | Plus |
