FMO03805.5prime Sequence
407 bp (407 high quality bases) assembled on 2008-07-21
> FMO03805.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGAGCTCCGTA
ATTCTGGCGGGTCTTAGCGTGGCCGCCGTGGGATTCGCCGGAAAGCACCT
GATGCGCCGCATGCCCCAGATGACCACCAAATTCAACGAGGCCCTCAAGA
ACCTGCCCAAATACGATGCGGAGAGCATGGCCGCCTCCAAATACTACAAG
GGCGGCTTCGATCCCAAGATGAACAAGCGGGAGGCGTCCCTAATCCTAGG
TGTCAGCCCCAGTGCGTCCAAGATAAAGATTAAGGACGCGCACAAGAAGA
TCATGCTGTTGAACCATCCGGATCGAGGAGGATCTCCCTATTTGGCGGCC
AAGATCAACGAGGCCAAAGACTTTCTGGACAAAGCGAAGGCAAGCTTTCT
AGACCAT
FMO03805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7394-RC | 1315 | CG7394-RC | 63..416 | 36..389 | 1770 | 100 | Plus |
CG7394-RD | 1431 | CG7394-RD | 179..532 | 36..389 | 1770 | 100 | Plus |
CG7394-RA | 534 | CG7394-RA | 63..416 | 36..389 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11562860..11563100 | 38..278 | 1205 | 100 | Plus |
3L | 28110227 | 3L | 11563301..11563413 | 277..389 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:35 has no hits.
FMO03805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:41 Download gff for
FMO03805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 56..416 | 28..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:41 Download gff for
FMO03805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RB | 115..475 | 28..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:33 Download gff for
FMO03805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 56..416 | 28..389 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:33 Download gff for
FMO03805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11562861..11563100 | 39..278 | 100 | -> | Plus |
3L | 11563303..11563413 | 279..389 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:41 Download gff for
FMO03805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11555961..11556200 | 39..278 | 100 | -> | Plus |
arm_3L | 11556403..11556513 | 279..389 | 100 | | Plus |