FMO03806.5prime Sequence
671 bp (595 high quality bases) assembled on 2008-07-21
> FMO03806.5prime
CGTATAGCATACATTAAACGAAGTTATCAGTCGACATGGCGAGGGCGGCT
TTTATTGTGTGCCTACTGATGGCCTGTGCCTGGAGCAGCCATGCGGTGAT
GTTCAAGCTGTCGCCGAACACCCAGAAGTGCCTCAAGGAAGACATCCAGG
CGAACCAACTGGTTATGGGCGAGTTCGAAGTTTCCGACGTACCCGGCCAG
ATCATCGACTACATTGCACGCGACACCAAGGGACACATCCTGTCGCAGAA
GGAGCACATCACTAAGGGCAAGTTCAGCTTCATGTCCGAGGTGTACGATA
CGTACGAAATCTGCTTTATATCCAAAGTTCCTGCACATCAACGCGGCGTT
ATACAGGAAGTATCGCTCTTGACCAAAAAGGGAGTGGAGACCAACAGCTA
CGAAGGCATTGGCGAATCATCCAAACTGAAGCCCCTTGAAGTTGATCTTA
AGCGTTTGGAGGATCTCTCCGACTCCATTGTGCGTGATTTCGTTCTCATG
CGCAAGCGGGAGGAGGAAATGCGCGATACCAATGAGAAAACCAACAGCCG
CGTGCTGTTCTTCAGCATCTTCAGCATGTGCTGCCTGCTCGGCTTGGCGA
CGTGGCAAGTTCTGTACCTCCGCAGGTACTTCAAAGCCAAAAAACTCATC
GAAGCAAGCTTTCTAGACCAT
FMO03806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bai-RA | 807 | CG11785-RA | 77..694 | 36..653 | 3060 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25039450..25039630 | 36..216 | 905 | 100 | Plus |
| 3R | 32079331 | 3R | 25040022..25040148 | 408..534 | 620 | 99.2 | Plus |
| 3R | 32079331 | 3R | 25039701..25039821 | 216..336 | 605 | 100 | Plus |
| 3R | 32079331 | 3R | 25040211..25040330 | 534..653 | 600 | 100 | Plus |
| 3R | 32079331 | 3R | 25039881..25039956 | 332..407 | 350 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:26 has no hits.
FMO03806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:41 Download gff for
FMO03806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bai-RA | 77..694 | 36..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:04 Download gff for
FMO03806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bai-RA | 76..693 | 36..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:58 Download gff for
FMO03806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bai-RA | 77..694 | 36..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:58 Download gff for
FMO03806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25039450..25039629 | 36..215 | 100 | -> | Plus |
| 3R | 25039701..25039821 | 216..336 | 100 | -> | Plus |
| 3R | 25039886..25039956 | 337..407 | 98 | -> | Plus |
| 3R | 25040022..25040148 | 408..534 | 99 | -> | Plus |
| 3R | 25040212..25040332 | 535..652 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:41 Download gff for
FMO03806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20865172..20865351 | 36..215 | 100 | -> | Plus |
| arm_3R | 20865423..20865543 | 216..336 | 100 | -> | Plus |
| arm_3R | 20865608..20865678 | 337..407 | 98 | -> | Plus |
| arm_3R | 20865744..20865870 | 408..534 | 99 | -> | Plus |
| arm_3R | 20865934..20866054 | 535..652 | 97 | -> | Plus |
