Clone FMO03807 Report

Search the DGRC for FMO03807

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:38
Well:7
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31917-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03807.5prime Sequence

508 bp (508 high quality bases) assembled on 2008-07-21

> FMO03807.5prime
CTTCGTATAGCATACATAATACAAAGTTATCAGTCGACATGACGGGTCGC
GAATCAAACGCATCAAGGACGCTGAAAAGAAGCGTGTCCTGGACTCCACA
GCCCGCCAGCGGCGTGCCCGCAAAGCCTTGGAGGCTCTGGAGCAGGACAA
CTACCACGATGACCCACACGCCGACCTTGTCATGTCCAAGAAGTTGCCCA
AATTCCAGGACAGCCTGAAGACCGGCAAGGAGAAGAAAGGCAAGCGCAAG
GGCGCCGAATACTTTCTCGTCAAGTATCGCAAGAACTTCCAGCAACTGCT
CGAGGAGGACAAGGACAAGCAGCCCAACTACGAGAGCGCCGCAGCGCCGG
CTCCACAAAAGCCACTGCGGCATTTCTGCGCCGTTTGCGGCAACTTCTCG
TTGTACTCGTGCACCGCCTGCGGAACGCGATACTGTTGCGTTAGATGCCT
GCAAACGCACCAGGACACGCGCTGCCTCAAGTGGACGGCCGCAAGCTTTC
TAGACCAT

FMO03807.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31917-RA 846 CG31917-RA 344..797 38..490 2230 99.6 Plus
Tfb5-RB 846 CG42373-RB 344..797 38..490 2230 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5009980..5010433 490..38 2205 99.6 Minus
Blast to na_te.dros performed on 2014-11-28 22:56:05 has no hits.

FMO03807.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:42 Download gff for FMO03807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31917-RA 340..802 31..496 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:11 Download gff for FMO03807.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31917-RA 331..793 31..496 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:39 Download gff for FMO03807.5prime
Subject Subject Range Query Range Percent Splice Strand
Tfb5-RB 340..802 31..496 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:39 Download gff for FMO03807.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5009975..5010433 38..496 98 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:42 Download gff for FMO03807.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5009975..5010433 38..496 98 -> Minus