FMO03808.5prime Sequence
424 bp (424 high quality bases) assembled on 2008-07-21
> FMO03808.5prime
ATGGCGCAACAGAGACGAGTTCGCCCTCGTCTGCCTCTTTTTGGCATGTG
ATTTGGTGCTGGGTCAGCAGCAGGCGGCCAACAGCTCGGATTCGGATTCG
GATGTGGCGGAAAGTCGTACTTTTGGCCATCATTTCCTGCGGCGCATCAG
CTTCGCCTTGGTGCCCGGCGCCTTTGTCGTGGGCGTGATCACCACCCTGC
TGGCGGCCTTGACCGTCGTCTCCATCAAGGGACTGGGCGTGGGTGTCATC
CTGCTGGTGCTGGCCATCGGACAAATGCTGTCCCGTGCTCTTCCCGTCCA
GGCAGCCGCCGCCTATGCCGCAGCACCCGTTCCCGTCCAGGCACCCGTGC
CGGTGGTCTACTCCCACTCGCACACCCAGCAGCCCGTCTGGTTGGAGAAG
GAGTGGGCAAGCTTTCTAGACCAT
FMO03808.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15887-RA | 863 | CG15887-RA | 131..518 | 19..406 | 1940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13288000..13288296 | 406..110 | 1485 | 100 | Minus |
| 3R | 32079331 | 3R | 13288592..13288683 | 110..19 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:29 has no hits.
FMO03808.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:36 Download gff for
FMO03808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15887-RA | 120..518 | 10..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:17 Download gff for
FMO03808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15887-RA | 117..515 | 10..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:22 Download gff for
FMO03808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15887-RA | 120..518 | 10..406 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:22 Download gff for
FMO03808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13288000..13288295 | 111..406 | 100 | <- | Minus |
| 3R | 13288592..13288694 | 10..110 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:36 Download gff for
FMO03808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9113722..9114017 | 111..406 | 100 | <- | Minus |
| arm_3R | 9114314..9114416 | 10..110 | 96 | | Minus |
