FMO03814.5prime Sequence
442 bp (442 high quality bases) assembled on 2008-07-21
> FMO03814.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGGTGCGTATGAACG
TATTGGCCGATGCCTTGAAGTGCATAAACAACGCCGAGAAGCGTGGCAAG
CGGCAGGTGCTGCTGCGTCCCTGCTCCAAGGTGATCATCAAGTTCCTGAC
CGTGATGATGAAGCATGGCTATATCGGCGAATTCGAGATCGTCGACGATC
ATCGTTCCGGCAAGATCGTTGTCAACCTGACCGGTAGGCTAAACAAGTGC
GGCGTCATCTCGCCCCGCTTCGATGTGCCCATCAACGACATCGAGAAATG
GACCAACAATCTGTTGCCCTCGCGTCAGTTTGGTTACGTTGTGCTCACCA
CCTCTGGCGGCATCATGGACCACGAGGAGGCTAGGAGAAAACATTTGGGA
GGCAAAATTCTCGGCTTCTTCTTCGCAAGCTTTCTAGACCAT
FMO03814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS15Aa-RF | 674 | CG2033-RF | 69..459 | 34..424 | 1955 | 100 | Plus |
| RpS15Aa-RE | 741 | CG2033-RE | 136..526 | 34..424 | 1955 | 100 | Plus |
| RpS15Aa-RD | 877 | CG2033-RD | 136..526 | 34..424 | 1955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13335988..13336378 | 424..34 | 1955 | 100 | Minus |
| 2R | 25286936 | 2R | 10821813..10822202 | 35..424 | 1845 | 98.2 | Plus |
| 2L | 23513712 | 2L | 14747021..14747075 | 424..370 | 245 | 96.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:55:35 has no hits.
FMO03814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:20 Download gff for
FMO03814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15Aa-RD | 132..526 | 27..424 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:42 Download gff for
FMO03814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15Aa-RC | 77..471 | 27..424 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:23 Download gff for
FMO03814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS15Aa-RD | 132..526 | 27..424 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:23 Download gff for
FMO03814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13335988..13336393 | 18..424 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:20 Download gff for
FMO03814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13230021..13230426 | 18..424 | 98 | -> | Minus |
