FMO03817.5prime Sequence
497 bp (497 high quality bases) assembled on 2008-07-21
> FMO03817.5prime
CGTATAGCATACTAAAAAGGAAGTTATCAGTCGACATGCCCAAGAATAAA
GGAAAAGGAGGCAAGAATCGTCGTCGTGGTAAGAACGAGAACGAGTTCGA
GAAGCGTGAGCTGATCTTCAAGGAGGACCAACAGGAGTACGCGCAGGTGA
CCAAGATGCTGGGCAACGGTCGTCTGGAGGCAATGTGCTTTGATGGCGTC
AAACGCCTGTGTCACATTCGGGGGAAACTTCGCAAGAAGGTGTGGATTAA
CCAGGGCGACATCATATTGGTGGGCTTGCGTGACTACCAGGACTCGAAGG
CTGATGTGATCCTCAAATACACACCGGACGAGGCCAGGAACCTGAAGACG
TACGGCGAGTTCCCCGAGTCGGTGCGCATCAACGAGACAGTCACATTCGT
GGAGGATGGCTTCGACGAGGACATCGAGTTCGGCGATGAGATCAGCTCCG
AGGATGACGCCGACTCCGTGGACAACATCGCAAGCTTTCTAGACCAT
FMO03817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-1A-RC | 1646 | CG8053-RC | 131..574 | 36..479 | 2220 | 100 | Plus |
| eIF-1A-RB | 1199 | CG8053-RB | 205..648 | 36..479 | 2220 | 100 | Plus |
| eIF-1A-RA | 1158 | CG8053-RA | 164..607 | 36..479 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18281692..18281933 | 238..479 | 1210 | 100 | Plus |
| 3R | 32079331 | 3R | 18274938..18275144 | 36..242 | 1035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:21 has no hits.
FMO03817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:29 Download gff for
FMO03817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-1A-RA | 156..607 | 28..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:10 Download gff for
FMO03817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-1A-RB | 197..648 | 28..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:22 Download gff for
FMO03817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-1A-RA | 156..607 | 28..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:22 Download gff for
FMO03817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18274930..18275141 | 28..239 | 98 | -> | Plus |
| 3R | 18281694..18281932 | 240..478 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:29 Download gff for
FMO03817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14100652..14100863 | 28..239 | 98 | -> | Plus |
| arm_3R | 14107416..14107654 | 240..478 | 100 | <- | Plus |
