FMO03820.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-07-21
> FMO03820.5prime
GTATAGCATATAAAAAAAAAAAGTTATCAGTCGACATGTCGGAAAGAGAA
GAAGAATCGATTGCATACTTGATGGAAAATGGCATTTTCCCTCGACTTCT
GGAGATTTTAAAGCAAATGGTGGATATCGATCCGTTGCCATCGGACCCTC
TGATGCACATTTTGCATTTTCTGGGCTGTCCGCTAATTCCGCAGGCCCAA
ATGAAGGCCCTGGAGCGGAAAGTGTCGCGTGCCCATGATGAGCTGCGCCA
TTTGCGCCGTTTGATCATCGATTTGGATGCCTTGGATCAGCTTTACGATG
GCGAAAACGAAGTGGAGGAGTATGTGGGCAATGTGGAGGAAGCCGTCTCA
TCATCGAGCGAAGATTCCATGGTGGAGAGCATTGAGACTACGATGGACTC
CACGAAACCGGAGCTTGGGCTATGTACACCGATGTCATCGCTCAAGGATT
CAAATCCTTCAAATCCAGCAAGCTTTCTAGACCAT
FMO03820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14545-RA | 813 | CG14545-RA | 99..532 | 34..467 | 2170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25850691..25850967 | 467..191 | 1385 | 100 | Minus |
| 3R | 32079331 | 3R | 25851032..25851193 | 195..34 | 810 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:30:27 has no hits.
FMO03820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:58 Download gff for
FMO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14545-RA | 96..532 | 30..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:53 Download gff for
FMO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14545-RA | 96..532 | 30..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:49 Download gff for
FMO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14545-RA | 96..532 | 30..467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:49 Download gff for
FMO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25850691..25850963 | 195..467 | 100 | <- | Minus |
| 3R | 25851033..25851198 | 23..194 | 95 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:58 Download gff for
FMO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21676413..21676685 | 195..467 | 100 | <- | Minus |
| arm_3R | 21676755..21676920 | 23..194 | 95 | -> | Minus |
