FMO03824.5prime Sequence
618 bp (380 high quality bases) assembled on 2008-07-21
> FMO03824.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGAATCAA
TGTCAGGTGATCACAAAATTTTATTAAAAGGACATTCCTCCCAATATTTA
AAACTTAATGTTGGTGGTCATTTATATTATACCACAATTGGAACACTGAC
GAAAAACAATGACACAATGCTGAGCGCAATGTTTAGTGGTAGAATGGAAG
TGCTGACTGATTCGGAAGGATGGATTTTAATCGATCGCTGTGGAAATCAT
TTTGGTATCATTCTTAATTATTTAAGAGATGGCACTGTTCCATTACCAGA
AACTAACAAGGAAATTGCAGAATTGCTTGCCGAAGCCAAATACTACTGCA
TTACCGAGTTAGCTATTTTCTGGGGAACGGGCACTATATGCTCCTTCAGG
AGCCAAGCCAATTTGCCGCATTCCACTTATACTTCCCAAAAGAAAAACAC
TTTTATTAAGTGTTCCTTTAAGCCGGCTGTATTCTGGGGGTCACGGCAAA
TACCAGTATTCTACCCAGTACTCCAAACACAACTTATAAAAATTTGATTT
TTTGAAAGCTTCTTTGCCTAACAACAATTTTGTTTATAAAAACATATGGG
CCAGAGAATTCGCGTGGG
FMO03824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10465-RA | 1241 | CG10465-RA | 254..829 | 38..591 | 2020 | 92.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5340561..5340742 | 219..38 | 910 | 100 | Minus |
2R | 25286936 | 2R | 5340258..5340514 | 471..217 | 895 | 94.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:59 has no hits.
FMO03824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:17 Download gff for
FMO03824.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10465-RA | 247..711 | 31..491 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:08 Download gff for
FMO03824.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10465-RA | 243..707 | 31..491 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:41 Download gff for
FMO03824.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10465-RA | 247..711 | 31..491 | 95 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:41 Download gff for
FMO03824.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5340198..5340512 | 219..523 | 91 | <- | Minus |
2R | 5340562..5340749 | 31..218 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:17 Download gff for
FMO03824.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1227703..1228017 | 219..523 | 91 | <- | Minus |
arm_2R | 1228067..1228254 | 31..218 | 98 | | Minus |