FMO03825.5prime Sequence
505 bp (505 high quality bases) assembled on 2008-07-21
> FMO03825.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGCAGCAGGTGG
AGAGGTTACGGGTGAGATTGGTGCCCGCCGGAACGGCGGAGGAACGTGCC
AGGAATATTATTGCCAATGTGGTCCTGGAGGATGGTCTGGTGCCCTTCAT
CGATGATCATGCGTCGGAGAAGGTGACCCTGATCCCCCAGCAGTCAGCTG
CTCCACTTTCCGCCGCCCAACAGGAACCATCCATCCGGTACTACGCCGTT
GGGCCCTCCACCTACAAGCTGTTGTGTCCACTGTGCCGCGAGAGGAGTGA
GGCGGCTGTGATGAGAGCAGCCAGCTGCAAGGACGCCAGTTTCTGCCTCA
GCCTGCTATCCTGCATCTTTCCGCTCTTCTGGATCTGCTGCGTGTGCACC
TGGTGCGGTTGCAATCGGGAGTGGACCACCAAGGGCGTTTACTGCAGCTC
GTGTGGCGGCAAAGTGGGAATCCAGCGCAAGGCCAAGGCAAGCTTTCTAG
ACCAT
FMO03825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3746-RB | 692 | CG3746-RB | 14..467 | 34..487 | 2270 | 100 | Plus |
| CG3746-RA | 569 | CG3746-RA | 14..467 | 34..487 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22649408..22649737 | 363..34 | 1650 | 100 | Minus |
| 2R | 25286936 | 2R | 22649220..22649348 | 487..359 | 630 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:12 has no hits.
FMO03825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:09 Download gff for
FMO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3746-RA | 6..471 | 26..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:43 Download gff for
FMO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3746-RA | 1..467 | 29..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:59 Download gff for
FMO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3746-RA | 6..471 | 26..493 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:59 Download gff for
FMO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22649216..22649343 | 364..493 | 97 | <- | Minus |
| 2R | 22649408..22649745 | 26..363 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:09 Download gff for
FMO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18536721..18536848 | 364..493 | 97 | <- | Minus |
| arm_2R | 18536913..18537250 | 26..363 | 99 | | Minus |
