FMO03826.5prime Sequence
533 bp (533 high quality bases) assembled on 2008-07-21
> FMO03826.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGACGTGGGCAGAT
ACCGCGAAGTTGAACGCCGAAAGTGGACTCCCCAAAACCAGGCCACGCTG
GATCACGTCTCGTGAGTTTCCTTCGGTGAGCAGGTCATGCCCTTCGTGCA
CATCCTGGACTTGGCTGACTCTGGCGCGATCAAGCCGCACGTGGACAACA
CTCGATTTTGCGGCAACACCACTGCGGGCATTAGCATGCTCAGCGACTGA
AGCGCGTGACCAAGGATCCCATGACTTTGTCAGCCACTCTGAGGATCTGC
TCCTGCCGCAACTCTCGCTCTATATTAAGAGTGCCCTAGCGCGATACGAG
TTCACCCACGAAATCCTGGCCAGAGATCAGTCGTGGTTCAAGGAGCGCTT
GGTCGAAACGAACCTTGATGGCATACGCATAGTTTCCTTTTCTCACAGCT
GGTGTACATGTATATATATATATATATACAATGAAAATTTATTCCGGTTT
GGTGATCAGCTAATGGCAAGCTTTCTAGACCAT
FMO03826.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14798-RA | 898 | CG14798-RA | 270..749 | 36..515 | 2400 | 100 | Plus |
| a6-RC | 2047 | CG3771-RC | 1968..2047 | 515..436 | 400 | 100 | Minus |
| a6-RB | 2218 | CG3771-RB | 2139..2218 | 515..436 | 400 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1693385..1693694 | 206..515 | 1550 | 100 | Plus |
| X | 23542271 | X | 1693162..1693323 | 44..205 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:44 has no hits.
FMO03826.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:08 Download gff for
FMO03826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14798-RA | 267..752 | 30..519 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:33 Download gff for
FMO03826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14798-RA | 255..740 | 30..519 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:14 Download gff for
FMO03826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14798-RA | 267..752 | 30..519 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:14 Download gff for
FMO03826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1693158..1693323 | 40..205 | 98 | -> | Plus |
| X | 1693385..1693697 | 206..519 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:08 Download gff for
FMO03826.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1587191..1587356 | 40..205 | 98 | -> | Plus |
| arm_X | 1587418..1587730 | 206..519 | 99 | | Plus |
