FMO03830.5prime Sequence
597 bp (597 high quality bases) assembled on 2008-07-21
> FMO03830.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTTCGTAAACT
CAAATTTCATGAGCAGAAGCTGCTTAAAAAGGTGGACTTCATCACCTGGA
AAGTGGACAACGGCGGCAAGGAGAACAAAATCCTTAGGCGCTTTCACATT
CAAAAAAGGGAGGACTACACCAAGTATAACAAGTTGTCCAGGGAGATACG
GGAACTGGCAGAGAGGATAGCTAAGCTGGATGCTTCAGAACCTTTCAAGA
CGGAGGCCACCACCATGCTCCTAAACAAGCTGCACGCCATGGGAGTTTCC
AATGATCAGCTTACTTTGGAAACGGCGGCCAAGATATCTGCCAGCCACTT
TTGCCGACGTCGTCTACCCGTGATCATGGTGAAACTTCGAATGTCGGAGC
ACCTGAAAGCGGCCACAGACCTCATAGAGCATGGTCATGTGCGTGTTGGT
CCGGAAATGATTAAGGATCCTGCTTTTCTGGTCTCCAGAAACCTCGAGGA
CTTTGTCACCTGGGTGGATGGCTCCAAGATCAAGGAGCATGTACTCCGCT
ACAACGACATGCGTGACGATTTCCAAATGGCAAGCTTTCTAGACCAT
FMO03830.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4866-RA | 692 | CG4866-RA | 69..611 | 37..579 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17518484..17518695 | 174..385 | 1060 | 100 | Plus |
| 2R | 25286936 | 2R | 17518753..17518946 | 386..579 | 970 | 100 | Plus |
| 2R | 25286936 | 2R | 17518291..17518430 | 37..176 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:56:21 has no hits.
FMO03830.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:51 Download gff for
FMO03830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4866-RA | 69..611 | 37..579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:44 Download gff for
FMO03830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4866-RA | 26..568 | 37..579 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:49 Download gff for
FMO03830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4866-RA | 69..611 | 37..579 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:49 Download gff for
FMO03830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17518484..17518695 | 174..385 | 100 | -> | Plus |
| 2R | 17518753..17518946 | 386..579 | 100 | | Plus |
| 2R | 17518291..17518427 | 37..173 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:51 Download gff for
FMO03830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13405796..13405932 | 37..173 | 100 | -> | Plus |
| arm_2R | 13405989..13406200 | 174..385 | 100 | -> | Plus |
| arm_2R | 13406258..13406451 | 386..579 | 100 | | Plus |
