FMO03832.5prime Sequence
738 bp (738 high quality bases) assembled on 2008-07-21
> FMO03832.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCCTCATGGAGGCACTGGG
GGATCTCTTGGCGCCACACAGCGAACTAATCGCCAAGGTAGCCGGCACCA
TAACTACCCTGCAATTTCTGTCCGGAGTGGTTCTGATGAACGACATCCGC
AAGAAGGGTAGCAGCGACGTCTACCCGGTGGGCCCATTTCTCTTCGGAGT
GGTGCTGACCGTTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTG
CCATGATCAATACGAATTTAATCGGCCTGGTGATAAACTTCGTCTTCCTC
TTCGGATTTTACTACTACGCCTCGAGCGCCAGCAGGAGCAAGATCTGGAA
GCAGATTGGCTATTCCTCGGTGTTCCTATTGGCCATCACCGCGTATGCCA
ACTTCGAGGATCCCGCCAAGATTGAGTTCCGCCTGGGAATGCTGATCACC
GGCATCCTGGTTTGGATGGTGGGCTCTCCCCTGCTGCATCTGCCGAAAAT
CATTGAGAAGAAGAGCACCGAGGGAATGCCGTTCCCGATTATCTTTGCCG
GTAATCTGGTGGCATTTTCCTGGACGCTGTATGCCATCTCCATCAAGAAT
ACTGTGATGGTGCTGCAGAACCTTTTGCTGCTGGTCCTGGGCGGCATTCA
GCTCTCCATGTTCGCTATTTATCCCAACAAACCGGCTGCCGAGAAGCCCA
AGGACAGCAAGAAGGACAAAGCAAGCTTTCTAGACCAT
FMO03832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7272-RA | 1191 | CG7272-RA | 152..837 | 35..720 | 3430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15502837..15503242 | 207..612 | 2030 | 100 | Plus |
| 3L | 28110227 | 3L | 15501089..15501261 | 35..207 | 865 | 100 | Plus |
| 3L | 28110227 | 3L | 15503307..15503415 | 612..720 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:59 has no hits.
FMO03832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:53 Download gff for
FMO03832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7272-RA | 152..842 | 35..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:13 Download gff for
FMO03832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7272-RA | 150..840 | 35..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:48 Download gff for
FMO03832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7272-RA | 152..842 | 35..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:48 Download gff for
FMO03832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15501084..15501260 | 31..206 | 97 | -> | Plus |
| 3L | 15502837..15503242 | 207..612 | 100 | -> | Plus |
| 3L | 15503308..15503420 | 613..728 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:53 Download gff for
FMO03832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15494184..15494360 | 31..206 | 97 | -> | Plus |
| arm_3L | 15495937..15496342 | 207..612 | 100 | -> | Plus |
| arm_3L | 15496408..15496520 | 613..728 | 96 | | Plus |
