FMO03833.5prime Sequence
586 bp (586 high quality bases) assembled on 2008-07-21
> FMO03833.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGGCA
AACTGATCATGAAGCGCAAGCGAGCCAGCCAGGAGGAGCAGCAGCAGGCG
CAGGAGCAACGTGTCCAGCCGCAGGAACAGCAACAGGAGCAGCAACCGAC
TGAAGCGGTTCCGGAGAAACGCCATCGTCCTCTAACTCCACCAGCAGAAG
AGCCAGGGCAGAATTGCCCCAACCCGCCAGATGCCCCCAATCGAATCCTT
CTGGAAGCGCTGCAAAAAATAATGGAGCTGCAAGCGGAGCTGGATGCCTT
TGAGCAGGATCTAAACGATCGAGATGGCTATGCGGCTGCCGGAGCTGAAG
CGGAGGATGTTGAGGAAAGTGACGAGGATGCCGAGGTGGCGGCCCAGTTT
GCGCCACCGACGCCAGCCCAAAGGAGTCAGGCGGAGGCACTGGGTTTTGC
CATGTGTGCCAGAGAAACATTGCTGTTTCTGCAGAGCGAGGGAATACCCA
CGGAGTCGCCACTCTACCAGACTCTCCTTGGGAAATTGGTTGGGCAAAGC
GATGGACTTCTGCACGCCGCAAGCTTTCTAGACCAT
FMO03833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insb-RB | 1059 | CG6520-RB | 306..834 | 40..568 | 2645 | 100 | Plus |
| insb-RA | 854 | CG6520-RA | 101..629 | 40..568 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17475439..17475967 | 568..40 | 2645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:21 has no hits.
FMO03833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:29 Download gff for
FMO03833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6520-RA | 101..636 | 40..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:45 Download gff for
FMO03833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6520-RA | 95..630 | 40..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:32 Download gff for
FMO03833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insb-RA | 101..636 | 40..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:32 Download gff for
FMO03833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17475432..17475967 | 40..574 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:29 Download gff for
FMO03833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13362937..13363472 | 40..574 | 99 | | Minus |
