FMO03837.5prime Sequence
676 bp (676 high quality bases) assembled on 2008-07-21
> FMO03837.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGGTTGCGCCACGA
CCAGCGTGAAGATCGCCTCCATCGTTCTGAATGCCGTTTTAGGGTTTCTT
GCTGCTGGGGCCATCGGCTGGATAGCTTACAATGCGGACACGGAGACGGA
GGAATTCGTAATAGCCGCTTACATCGCGTGCTCGCTCATCCTGGTCTTTG
CTCTGCTGGGCATCTTCGCGGCCATCCGGGAATCGGTGGTGCTGACTGCA
ACGAGTGCTGTCTTCCTGCTGATCTTGGCCATCCTGCAGATCGTGAGCAC
CTGCCTGTTCCTCCACGAGTTCGACGTGAAGAGCGGCCGGGACATGGTGG
AGGTGGCCTGGCAGGCGAACAACATGGATTCCTTGCAGCAGAAGCACGAG
TGCTGCGGCCAGAGCAGCGCCCAGGACTATATCCACCTCAGCCTGCTGAT
CCCGCCCAGCTGCTACGCGGATCTGCAGCAGACCCCCGACCACCTCTATC
TGGACGGGTGCATCGAAAAGGTGCAGAGCTTCTACGAAAGCGACAAGCTG
CGCTTCATCATAGTGTCCTGGGTGCTAGTGGCCTTCGAGTTAATCTGCTT
CGCCTTGGCCGTGTTTCTGGCCATTAGTTTTAAGAACAAGCAGCGACGGA
TGGAGTTCGCAAGCTTTCTAGACCAT
FMO03837.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lbm-RB | 923 | CG2374-RB | 80..703 | 35..658 | 3120 | 100 | Plus |
| lbm-RA | 1029 | CG2374-RA | 186..809 | 35..658 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7051277..7051613 | 253..589 | 1685 | 100 | Plus |
| 2R | 25286936 | 2R | 7051062..7051221 | 94..253 | 800 | 100 | Plus |
| 2R | 25286936 | 2R | 7051674..7051744 | 588..658 | 355 | 100 | Plus |
| 2R | 25286936 | 2R | 7050044..7050103 | 35..94 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:03 has no hits.
FMO03837.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:38 Download gff for
FMO03837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lbm-RA | 179..814 | 27..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:37 Download gff for
FMO03837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lbm-RA | 174..809 | 27..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:05 Download gff for
FMO03837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lbm-RA | 179..814 | 27..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:05 Download gff for
FMO03837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7050037..7050103 | 27..94 | 94 | -> | Plus |
| 2R | 7051063..7051221 | 95..253 | 100 | -> | Plus |
| 2R | 7051278..7051613 | 254..589 | 100 | -> | Plus |
| 2R | 7051676..7051749 | 590..666 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:38 Download gff for
FMO03837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2937542..2937608 | 27..94 | 94 | -> | Plus |
| arm_2R | 2938568..2938726 | 95..253 | 100 | -> | Plus |
| arm_2R | 2938783..2939118 | 254..589 | 100 | -> | Plus |
| arm_2R | 2939181..2939254 | 590..666 | 94 | | Plus |
