FMO03838.5prime Sequence
633 bp (633 high quality bases) assembled on 2008-07-21
> FMO03838.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTTGGCTGGT
TGTTTTGTTGATCCTGTACGTAATCTGGGATGTCAACTACTTCATCCGCT
GCGTGTTCACGGTGTTCGCCGGCCGGCTGTTCCAGCGGAAGCGCAAGGTC
ACGGACACCACGACGATCTATGGACTGTGCACCTCGCAGGACGTGGACAT
CTTTATCCGGCACATGAACAACGCCCGCTATCTGCGCGAACTGGACTTTG
CCCGCTTCCATTTCTACGCCCTCACTGGACTCTATGAGCGCATCCGGGAC
CGACGCGGCGGTGCCGTCCAGGGAGCCAGCAGTGTTCGCTACCGCCGCAC
CATACCCATCTTCCATCCGTACAAGATTCAGACCAAGCTGATCTGGTGGG
ACGACAAGGCCATTTACCTGGAGCAGCAGTTTATTACCCTTTCGGACGGA
TTTGTACGCGCGGTGGCCATGTCCAAGCAGAACATCACCAACTGCAATGT
GCTGGAGGTACTGAAGACCTATCCGGAAACTGCCCAGCGACCGGAGAAGC
CGGAGGAGCTCAAGCTCTGGCTGGATGCCATCGAGCTGTCCAGCCAGAAG
CTGCGAAAGGACAAGGCAAGCTTTCTAGACCAT
FMO03838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4666-RB | 1363 | CG4666-RB | 484..1062 | 37..615 | 2880 | 99.8 | Plus |
| CG4666-RA | 1107 | CG4666-RA | 228..806 | 37..615 | 2880 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6076373..6076951 | 615..37 | 2880 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:26 has no hits.
FMO03838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:32 Download gff for
FMO03838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4666-RA | 218..810 | 23..619 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:31 Download gff for
FMO03838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4666-RA | 170..762 | 23..619 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:58 Download gff for
FMO03838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4666-RA | 218..810 | 23..619 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:58 Download gff for
FMO03838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6076369..6076961 | 23..619 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:32 Download gff for
FMO03838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5970402..5970994 | 23..619 | 98 | | Minus |
