FMO03848.5prime Sequence
1205 bp (1045 high quality bases) assembled on 2008-07-21
> FMO03848.5prime
CGTATAGCATACATAAAACGAAGTTATCAGTCGACATGACGTCCGCAAGC
GATACAGAACCCACTGCAGTAACGCTGCTCCAGCTGAATGACGATGTCCT
GGCTTTGATCATCCGCCAGCTGGACACGTACCAGCAGTTCCAGATTAGCA
GGTTGAACAGGCGCTTGGCGGGCGTAGTGCACATGCTCTGGGAGACCCGT
GTTCGCAACGTTGTCCTGCAGGACGAGATGTTCGGACGCTCGGGAGCCAA
TTCCCGACAGTTTGTGGCTTTCATCTTGGCCCTGGCTCCGCACATGCAGC
ACCTGAGTTGCAAGCAGTTGGATGTCCGAAGACTGCGACTGCTCAGTAAC
CACACGCTGGAGAGGATTCACTCTTTCGAGTGGCTGGGCAATGTGTATAG
ACGGAGACGCGTTCGCTTCGTGGATGAGGATGTGCGAATGCTGCAGAGGG
TATTTCCCAATCTAAAAAGCCTCAAACTTAGAGGCTGCCAAATTACCGGA
AAATACCTATGCGACCTGGATGAGCTTACCGATCTCCGCCTGCATGATTG
CCATTTTCTGGAATCGCAACACTTTAGGGACATCTTCCGGCAGCTGCGAC
TACGCAAATTTGACATAATGGAGGACTGTGACGAGGTGAACTGCTGTGAT
CTGGCGGATCTGCAGCTGTGTCCCACACTGGAGCATATCAAGATTGCGGA
TTACCACGTGTGTATGGAGTCGGATATTACGCAGCAACTACTGACATTGC
CAAACCTGCGAAAGCTGTCGATCTATTCCAGGAACTTTGTCTTTGATGTC
CTATCGAGGATAGTTAGTCCCACAAGTCCTCCCGGCGATGGCCGACAAAT
TGAGGCCTTTAGTTTCAGTGGAGTTTTGCACGACTATGGCCGGTTCTTCA
GGAGCTGGGAAATCTTAGTCACTTGACGCGACTGGAGCTGCACAGCCAGC
CAGAGGAGAGAGAGAAGGAGAGGCGTCCAGGTGCAGTGCTGGGGGATCAG
ATACTGCGCAGCTAGCCAGTCAACTGGGTGAGCTAACCGACTCATTTGTG
TGCCTACGTGGAGAGTCTTTGGGCCTGCTGAATTCTGATACATTGCGACA
GCTGAAAGTCCTCGGCATCACTCGAACTCTGCATGGAAATCCTTCCTGAA
GGTATTGGCCATTGGACAAGAAGCTGGCCCATTGCCTCTAGAGCGGTGGA
TCCGG
FMO03848.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14937-RA | 1596 | CG14937-RA | 40..1239 | 36..1205 | 5125 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11792956..11793948 | 1040..56 | 4610 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:56 has no hits.
FMO03848.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:42 Download gff for
FMO03848.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14937-RA | 40..1239 | 36..1205 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:14 Download gff for
FMO03848.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14937-RA | 37..1236 | 36..1205 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:52 Download gff for
FMO03848.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14937-RA | 40..1239 | 36..1205 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:52 Download gff for
FMO03848.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11792769..11793946 | 58..1205 | 96 | <- | Minus |
2L | 11794026..11794047 | 36..57 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:42 Download gff for
FMO03848.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11792769..11793946 | 58..1205 | 96 | <- | Minus |
arm_2L | 11794026..11794047 | 36..57 | 100 | | Minus |