FMO03851.5prime Sequence
1198 bp (1023 high quality bases) assembled on 2008-07-21
> FMO03851.5prime
TATAGCATACATTTTACGAAGTTATCAGTCGACATGAGCGGCGTGGAGGA
GCAGGCGAGTCTGCTGCGCGTACTGATCAACTGTGCGGAGAAGGCGGCCA
ACATAGCCAGGATATGTCGCTCCAACGAGCAGCTCCTGGCATTGCTGGTG
CAGGAGAAGATCGGATCCGAGGCCAATGAGCGCTTCGAGCACGACTTCAA
GACCCTGGCCGATGTGCTCATCCAGGAGACGATCAAGCACGAGGTGGGTG
CGCTCTTTCCTGCCATGAAGGATGCCATCCTGGGCGAGGAATCGCCCAAT
TTCACCAACCAACTGGGCGAGAGTGTCACCATTGCAGTGGGTGCCACTGA
GGAGGACACCGCCGCCTGTCTGCAGGCTGTACTCAGCGGGCACGAGGATG
CGGCCAGTGCTCTGGCCACCGAAGTCCATCGGGATGTCAGCTTCAGCAGC
GAAAAGCTGGGCGAGATTGCCCAACTGCCGGACGAACTGGATTACGGCAA
TTTGGGCATCTGGATCGATCCAATTGACGCTACCGCCGAGTACATTTCGG
GTGACACCATGTTCACCGACTTTCCCGGCATCACGTCCACTGGCCTGGAC
TGCGTCACCGTGCTAATTGGCGTCTACGAACGGGACACCGGCGTACCGGT
GATGGGAGTGGTGGCTCAACCGTTCGGGGAGAAGCTGGAGGAGAACGTGT
ACAGCTCCTCGATGTTCTGGGGCGTCTGCCTGCCGACGGTAAGGGCACAC
AACTGCGACTTTGAGGCGCGCGATGAGAACCGCCGTTTGGGCATCTTCTC
CAGCTCGGAACAGTCCGATATCCTTCAGCGTTTCCTCGATCTGGGCTACG
AGTTTGCATTCTCCGCCGGTGCTGGACATAACGCCTTGAAGGTGATTACC
CACGAGGTGGATGTGTATCTGCTTAGCAAAGGCTCCACCTTTCAAGTGGA
CACGTGTGCTCCGCAAGCCATACTCCGTGCGCTCGGCGGAGATGTGCTGG
ACTTATGCGGCCAGTGTGCGAGCAACGCCAGTGCCATTGAGTACCTGATG
AGATGCTGAGCCGATGCCGATTGCAAGCGAACGCGGTGTATATCCTCTGT
TGCGCAATGTCCATGTTTGATGACTGCTGCCCAATTGCCGACAGCAGCTT
TCTAGAACATTCGTTGGCGCGCGGCCCAGGTAAAGGTGTCTCTATACC
FMO03851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ipp-RA | 1402 | CG3028-RA | 134..1245 | 34..1134 | 5030 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13958922..13959414 | 34..526 | 2465 | 100 | Plus |
| 3R | 32079331 | 3R | 13959698..13960189 | 526..1018 | 2325 | 98.6 | Plus |
Blast to na_te.dros performed 2014-11-28 22:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1307..1363 | 620..563 | 125 | 72.9 | Minus |
FMO03851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:30 Download gff for
FMO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipp-RA | 168..1247 | 26..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:19 Download gff for
FMO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipp-RA | 168..1247 | 26..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:17 Download gff for
FMO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipp-RA | 130..1209 | 26..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:17 Download gff for
FMO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13958918..13959414 | 26..526 | 99 | -> | Plus |
| 3R | 13959699..13960281 | 527..1100 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:30 Download gff for
FMO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9784640..9785136 | 26..526 | 99 | -> | Plus |
| arm_3R | 9785421..9786003 | 527..1100 | 96 | | Plus |
