FMO03853.5prime Sequence
795 bp (795 high quality bases) assembled on 2008-07-21
> FMO03853.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCCAAAGTAGT
GTCGCGCAGTATCGTCTGCTCCGATACCAAGGATCAGGAGGAGTACAACG
AGGAAAAGCCGCTAAACATTTACTACTGTCTGTGCAACAAGATGGCTCTG
ATTCTGGATTGCACCCTCGAACAGTTGCCGCTACGAGAGGTGGACAACGC
CCGTGTGATAAACGCCAACGACCATGCCAACAAACTCACCCACAATCCCA
CACCGAGGATGGTCTACATCAAACGCAAGAGCAGGGGCAATGGGATCGAG
AAGCAGTACCGCTACAAGTGCCGAAGCTGCAGTCTGCCGCTTTACTATCG
CCACAGTCCCGACTCCCACGTAACCTTCGTCATGTCCAATGCCCTAATCC
GCAACAAGGGTGAGAGTCCTCTCACACAGCTGCTGAATTCGGAGATCAAG
GGCAGTTTCAAGGCACCGGCTGCCAAGCCAGCGACTTCCGCCGGTCCAGA
CGATTCGGGTATTGTGGATGCCAGTGGCAAGAAGGTCGTCGTCACCAGAC
ACACGAAGAACATGGGCAAGTTCAGCTCGGTCACGGTGTCTACCATCGAC
GAGGAGGAGGATGAAATCGAGGCGCGCGAGATCGCAGACAGCTATGCGAA
CAACGCAAGGATTATCGAGAAGCAACTGCAGCGCAAAGGCGGAAAATTGA
GCGATGTGGGCATCAAAACCAAGACAGAGGACGCACCTCCGCCGCAGAAG
AAGCAGCGCGGCACGCTACTGGAAAGAGCAAGCTTTCTAGACCAT
FMO03853.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16865-RB | 1549 | CG16865-RB | 123..864 | 36..777 | 3710 | 100 | Plus |
CG16865-RA | 915 | CG16865-RA | 123..864 | 36..777 | 3710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13812050..13812357 | 317..624 | 1540 | 100 | Plus |
2L | 23513712 | 2L | 13811825..13811986 | 157..318 | 810 | 100 | Plus |
2L | 23513712 | 2L | 13812478..13812631 | 624..777 | 770 | 100 | Plus |
2L | 23513712 | 2L | 13811644..13811765 | 36..157 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:56 has no hits.
FMO03853.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:15 Download gff for
FMO03853.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16865-RA | 123..864 | 36..777 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:23 Download gff for
FMO03853.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16865-RA | 119..860 | 36..777 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:38 Download gff for
FMO03853.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16865-RA | 123..864 | 36..777 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:38 Download gff for
FMO03853.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13811826..13811986 | 158..318 | 100 | -> | Plus |
2L | 13812052..13812357 | 319..624 | 100 | -> | Plus |
2L | 13812479..13812633 | 625..782 | 97 | -> | Plus |
2L | 13811644..13811765 | 36..157 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:15 Download gff for
FMO03853.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13811644..13811765 | 36..157 | 100 | -> | Plus |
arm_2L | 13811826..13811986 | 158..318 | 100 | -> | Plus |
arm_2L | 13812052..13812357 | 319..624 | 100 | -> | Plus |
arm_2L | 13812479..13812633 | 625..782 | 97 | -> | Plus |