FMO03860.5prime Sequence
492 bp (492 high quality bases) assembled on 2008-07-21
> FMO03860.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCGAGGCCGG
CACCAGCGCGGATGCAGTGGCCGCCGAGAAGGAGCGCAAGTTCCGCATCC
AGGCCGCCGCCTTTCTGGGTTTGGTGGGCGGGGTGTCCGCTCTGTTCGGC
TTCTCGCGCACGCTGGCCACCGCCAAGAAGACGGATAGCAAGGTCCTCCA
GCAGGCTGGAACGCGGCAAGGCATGATCCTGATGGACGAGGGCGCCACCC
TGGCCCTGCGGGCGCTGGGCTGGGGCACACTGTACGCCGTGATGGGCACC
GGCGCCTTCTGCTACGGCTTCTGGAAGCTATCCGGAGCCAAGGATTTCCA
GGAGTTCCGCCTCAAGATGGGCAATGCACTGCCAAGAATCACCAAGGACG
AACCACCAGCCAGCCGCACCGATTTCGAGAGTCTCACGGACCTCATGAAA
TACCTGGCAGCCTGGAACAAGGAAGCAAGCTTTCTAGACCAT
FMO03860.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11699-RA | 640 | CG11699-RA | 90..527 | 37..474 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11570866..11571108 | 103..345 | 1215 | 100 | Plus |
| X | 23542271 | X | 11571169..11571297 | 346..474 | 645 | 100 | Plus |
| X | 23542271 | X | 11570710..11570776 | 37..103 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:05 has no hits.
FMO03860.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:58 Download gff for
FMO03860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11699-RA | 84..536 | 30..485 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:18 Download gff for
FMO03860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11699-RA | 81..533 | 30..485 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:07 Download gff for
FMO03860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11699-RA | 84..536 | 30..485 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:07 Download gff for
FMO03860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11571169..11571306 | 346..485 | 96 | | Plus |
| X | 11570704..11570776 | 30..103 | 94 | -> | Plus |
| X | 11570867..11571108 | 104..345 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:58 Download gff for
FMO03860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11464737..11464809 | 30..103 | 94 | -> | Plus |
| arm_X | 11464900..11465141 | 104..345 | 100 | -> | Plus |
| arm_X | 11465202..11465339 | 346..485 | 96 | | Plus |
