FMO03863.5prime Sequence
531 bp (531 high quality bases) assembled on 2008-07-21
> FMO03863.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACCAACTCAAA
GGGCTATCGTCGCGGCACACGGGACATGTTTTCCCGTCCCTTCCGAAAGC
ATGGAGTTATTCCGTTGTCCACATACATGCGGGTTTTCAAGATCGGCGAC
ATCGTTGACATTAAGGGACATGGTGCTGTACAGAAGGGTTTGCCCTATAA
GGCATATCATGGCAAAACCGGGCGCATATTCAATGTGACTCAGCACGCCG
TTGGTGTAATAGTAAACAAACGCGTAAGAGGCAAAATCCTTGCTAAGCGG
GTCAATGTGCGCATTGAGCACATCCACCACTCCAAGTGCCGCGAAGATTT
TTTGCGCCGCGTAAAGGAAAATGAGCGATTGCTGAAGGAGGCGAAGGAAA
AGGGACAATGGGTCAGTCTGAAGCGCCAGCCGGAACAGCCGAAGAAGGCG
CACTTTGTTAAGAAACTTGAAGAACCGATTGCTCTGGCCCCGATTCCATA
CGAATTCATTGCCGCAAGCTTTCTAGACCAT
FMO03863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL21-RC | 656 | CG12775-RC | 97..573 | 37..513 | 2385 | 100 | Plus |
| RpL21-RB | 662 | CG12775-RB | 68..544 | 37..513 | 2385 | 100 | Plus |
| RpL21-RA | 614 | CG12775-RA | 55..531 | 37..513 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22247229..22247705 | 513..37 | 2385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:56:02 has no hits.
FMO03863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:39 Download gff for
FMO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL21-RA | 55..541 | 37..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:03 Download gff for
FMO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL21-RA | 55..541 | 37..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:38 Download gff for
FMO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL21-RA | 55..541 | 37..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:38 Download gff for
FMO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22247218..22247704 | 38..522 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:39 Download gff for
FMO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22247218..22247704 | 38..522 | 99 | <- | Minus |
