Clone FMO03870 Report

Search the DGRC for FMO03870

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:38
Well:70
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7603-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03870.5prime Sequence

422 bp (422 high quality bases) assembled on 2008-07-21

> FMO03870.5prime
CTTCGTATAGCATACATTTTACGAAGTTATCAGTCGACATGGTTCTAGGA
TTTCTAGTGCGCGGCGGTCTGGTGGCCGCAACCGTCTACTACACACAAAA
GGTGGGCATCTGGGGAGACTCTGACCAGACGGACAAGCTGTACAACGACA
TCAAGTCGGAGCTGCGCCCGCATGTCCAGAAGCTGGAGAAGCAGCTGCCC
TTCGAAGTGCCGCAGTTGCCCAAAACCGGCGAGATGCGCTTCCTGGCCAA
GCACTACTACAACGAGGGCGTGAAGAACACCTTCCGTTTCATCCACATGC
TGCCCTGCTACGCAGGCAGGGGCCTCAAGAAGGTCAAGGACACGTTCCAG
GACTTTGCCCAATCCCCAGCCATCGCCGGCGGTGCGGAGTCCAGTCCGCC
GAAGGCAAGCTTTCTAGACCAT

FMO03870.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG7603-RA 762 CG7603-RA 180..547 37..404 1840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17466198..17466553 49..404 1780 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:26:32 has no hits.

FMO03870.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:53 Download gff for FMO03870.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7603-RA 180..553 37..411 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:02 Download gff for FMO03870.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7603-RA 176..549 37..411 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:01 Download gff for FMO03870.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7603-RA 180..553 37..411 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:01 Download gff for FMO03870.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17466189..17466559 40..411 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:53 Download gff for FMO03870.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17459289..17459659 40..411 97   Plus