FMO03875.5prime Sequence
738 bp (738 high quality bases) assembled on 2008-07-21
> FMO03875.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAAGGCTAT
TAAGTATTATTACGATTTCCTATCGCAGCCATCCCGCGCCCTCTGGATTG
CTATGAAATTGGGCAAGACCCCATTTGAAGACTGCCCGGTTGCCCTGCGA
AAACAGGAGCAATTGACCGACGAATATCGCAGTATAAATCGGTTCCAAAA
GGTGCCGGCCATCGTGGATGGTAAATTTCAGTTGGGCGAGAGTGTCTCCA
TAGTGCGATATCTCGCGGACAAGGGAGTCTTCAGTGAACAGCTGTACCCC
AAAACCTTGGAGGAACGCGCGCGGGTGGACGAGTTCCTCGAGTGGCAGCA
TTTCAATGTCCGCTTGGTCTGCTCCCTGTTCTTCCGTCAGGTGTGGCTTC
TTCCGGCAAAGGGACTGGCGCCGGCTCCCAAGCCAGAGTCTGTCAAGAAG
CTAATCAAGGATGTGGAGAGTAATTTGGGTCTACTGGAACGCCTCTGGCT
GGAAAAGGACTTCTTAGTCGGCGACAAACTTACCGTGGCAGACATCTTCG
GGTCTTCAGAAATTAATCAGATGAAGCTCTGCCAGTACAACGTAAATGAG
AAGCAATTCCCCAAGGTGGCCAAGTGGATGGAACGCGTTCGTGATGCTAC
CAATCCCTACTACGATGAGGCCCACAGCTTCGTCTACAAGACCTCTCAGC
AGGCAGTCAAGGCCAAAAACGCAAGCTTTCTAGACCAT
FMO03875.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT1-RA | 997 | CG30000-RA | 100..783 | 37..720 | 3420 | 100 | Plus |
| GstT2-RA | 887 | CG30005-RA | 172..677 | 133..638 | 335 | 72.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9606446..9606763 | 257..574 | 1590 | 100 | Plus |
| 2R | 25286936 | 2R | 9606825..9606970 | 575..720 | 730 | 100 | Plus |
| 2R | 25286936 | 2R | 9606087..9606204 | 37..154 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 9606280..9606382 | 155..257 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:20 has no hits.
FMO03875.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:18 Download gff for
FMO03875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT1-RA | 100..783 | 37..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:39 Download gff for
FMO03875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30000-RA | 98..781 | 37..720 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:20 Download gff for
FMO03875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT1-RA | 100..783 | 37..720 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:20 Download gff for
FMO03875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9606447..9606763 | 258..574 | 100 | -> | Plus |
| 2R | 9606825..9606970 | 575..720 | 100 | | Plus |
| 2R | 9606087..9606204 | 37..154 | 100 | -> | Plus |
| 2R | 9606280..9606382 | 155..257 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:18 Download gff for
FMO03875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5493592..5493709 | 37..154 | 100 | -> | Plus |
| arm_2R | 5493785..5493887 | 155..257 | 100 | -> | Plus |
| arm_2R | 5493952..5494268 | 258..574 | 100 | -> | Plus |
| arm_2R | 5494330..5494475 | 575..720 | 100 | | Plus |
