FMO03877.5prime Sequence
885 bp (885 high quality bases) assembled on 2008-07-21
> FMO03877.5prime
TATAGCATACATTAAACGAAGTTATCAGTCGACATGGCTGCTGTTGTTCC
CACTGAAACCTCCGCCGCCCCCGCCTCCTGGTGTGGGCGCGGTGCCAAGC
CCCGAACCTTTGAAAAGGAACCGCCAGTCATCTGCTATGACAAGCCCGCA
GCTTCGATCGTTTCGAAGGAGGAGTATGATAATAAACGTTATCGTGCCCT
GACTGGCGATCTTGTGGAGACACTGATTGTGCCCAAACGGGAGGCACGCA
CCTGGACAATGCAAGAGGGTGATTTGTGCCGCGTCACTGTCCACGAAGGT
TCTCAGGTGGGCGACATGAACTTTTGGAATCTGGAGAACACCGCCGAGCG
CTTCTACTCGGGCAAGACGCGCCAGCTGCACTCGTCGCATCTGCGCGTTT
ACGATCGTCTGTGGAGCTGCCTGCCCCACCTGCGTCCCATGGCCACCTTT
GTGTTTGATTCCCTTGCCGCCTATGGCATCGATGAGGATGGCGGTGCTCT
GCACGACGTAATTGGAACACGGTGCGACGACTACACCTACAAGCTAATCA
CGGGCAAGGATCGGGTGGGCAGTTGCCACAGTTCCCTAGTCAAGGCGGTG
GTGGAGGAGCGCGGGCTGACCGAGCAGGATGTACACGACGTGTGGAACAT
CTTTATGTGCACCGGATTTACACGGGACACGCATCAGTATTTCTGCAAGG
CAAGTCCAGCGCGCAAGGGGGATTTCATTGAGTTTGTGGCCGACATGAAT
CTTCTGGTGGCTCTGAGCGCCTGTCCACAGGGCGATGTCTCCATCGCAGT
GGGCGCCGATGTGCCGGACGACAAGTGCCACCCCCTCAAGGTCGAAGTGT
TCCGTCGCAAGGCAAGCTTTCTAGACCATTCGTTT
FMO03877.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10208-RA | 1064 | CG10208-RA | 95..923 | 33..861 | 4145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23773139..23773819 | 861..181 | 3405 | 100 | Minus |
| 3R | 32079331 | 3R | 23773886..23774033 | 180..33 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:31 has no hits.
FMO03877.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:13 Download gff for
FMO03877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10208-RA | 84..926 | 21..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:52 Download gff for
FMO03877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10208-RA | 80..922 | 21..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:49 Download gff for
FMO03877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10208-RA | 84..926 | 21..865 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:49 Download gff for
FMO03877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23773135..23773819 | 181..865 | 99 | <- | Minus |
| 3R | 23773886..23774044 | 21..180 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:13 Download gff for
FMO03877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19598857..19599541 | 181..865 | 99 | <- | Minus |
| arm_3R | 19599608..19599766 | 21..180 | 97 | | Minus |
