FMO03884.5prime Sequence
918 bp (918 high quality bases) assembled on 2008-07-21
> FMO03884.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACAAACTGAA
ATCCAGCACGCACCGCGATAAGGTGAAGAAGTTCATATCGCTGACACACA
CGGGGGAACAGACGGCAATATTCTGTTTGCAACAGAACGACTGGAAATTC
GAGTTGGCCAGCGACAATTACTTCCAGAATCCGGAGTACTATTACCGGGA
GTTGGATCGCAAGCGCATCGAGCAGCTATTCATGCGCTATCGGGATCCCA
GTGATCCCCTAAAGATCGGATCCCAGGGCGTAATCCACTTCCTGGAGGAC
TTGGACCTGAAGCCAGACTCAAAACTGGTGCTGATCATAGCGTGGAAATT
CCACGCCGAGGTGCAGTGCGAGTTCTCGCGTGATGAGTTTATCAATGGCA
TGTGCGACCTGGGCATCGATAGCATCGACAAGCTAAAGACCAAGCTGCCC
ATCCTTGAGCAGGAGCTGAACGACGCCGGCAAGTTCAAGGACTTTTACCA
CTTTACCTTCAACTACGCCAAGGATCCGGGGCAAAAGGGCATTGACCTGG
AAATGGCAATCGCCTACTGGTGCATCGTTCTTAGTGGGCGCTTCAAGTTC
TTGGACATCTGGTGCCAGTTCCTCGAGGAGAAACACAAGCGGGCCATCTC
GCGAGATACGTGGAACCTGCTGCTCGACTTTGCCACCAACATCGACGACC
GGATGAGCAACTACGATTCGGAGGGCGCCTGGCCGGTTCTAATAGACGAC
TTTGTGGAGTGGTGCCAGGAGAACGATCATCTCAAGGGAGGACTCCTCGC
CGGCATCCGGCTACCAGCAGCAGTCCAGTGCTAGCTCCAGCTCCCAAAAG
AACATATCCAGCGCCTACCAGACCTCGCACAGTACAACATGAACTATGGC
GCAAGCTTTCTAGACCAT
FMO03884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7427-RE | 1226 | CG7427-RE | 213..1076 | 37..900 | 4275 | 99.8 | Plus |
| CG7427-RA | 1601 | CG7427-RA | 301..1164 | 37..900 | 4275 | 99.8 | Plus |
| CG7427-RD | 1472 | CG7427-RD | 461..1322 | 39..900 | 4265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15564261..15565122 | 39..900 | 4215 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:44 has no hits.
FMO03884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:05 Download gff for
FMO03884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 29..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:49 Download gff for
FMO03884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 283..1156 | 29..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:28 Download gff for
FMO03884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 29..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:28 Download gff for
FMO03884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15564242..15565125 | 23..904 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:05 Download gff for
FMO03884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15557342..15558225 | 23..904 | 98 | | Plus |
