FMO03887.5prime Sequence
827 bp (477 high quality bases) assembled on 2008-07-21
> FMO03887.5prime
GCATACCTTATACGAAGTTATCAGTCCACATGACATTCGGCAAAGTACCG
ATTTTGCTCTGCAGCTTTCTGCTGTTCTTGGTGCTGCCCGTACAGTCGGC
GCCTGGTAAACTGAACGGTCGAGTGGTGGGCGGTGAGGATGCGGTGAAAA
ATCAGTTTCCCCACCAGGTCTCCCTGAGGAACGCCGGTTCCCACAGCTGT
GGAGGTTCAATTCTGACCAGAACCTACATCTTAACCGCCGCCCATTGTGT
CTCCAACGAGGACGTGAATCATGTGATTACGCCAATCGCTGCGGAGCGTT
TCACCATTCGAGCGGGCTCAAACGATCGATTCAGCGGTGGAGTCCTTGTC
CAGGTGGCCGAGGTAATTGTCCACGAGGAGTATGGTAACTTCCTTAACGA
CGTTGCTCTGCTGCGACTAGAGAGCCCACTGATTCTGTCCGCGAGCATTC
AGCCCATCGATCTACCCACTGTGGATACGCCAGCGGATGTAGATGTCGTA
ATTTCCGGATGGGGAAGGATCAAACACCAGGGAGACTTGCCACGCTATCT
GCAATACAACACCCTAAAGTCGATAACCAGGCAGCAGTGTGAGGAGCTGA
TCGATTTCGGATTTGAGGGCGAGCTGTGCCTGCTCCACCACGTGAACAAT
GGAGCTTGCAATGGCGATTCCGGTGGCCCGGTCGTATATAACAACCACCT
GGTGGGCGTGGCCGGATTCGACGTGGACAGATGTGGGTCCCCCTACCCGG
ACGGATATGCCAGGGTCTTTTACTTTAATGACTGGATCAAAAAGCACTCT
GATGTCGCAAGCTTTCTAGACCATTCA
FMO03887.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ser6-RA | 901 | CG2071-RA | 19..795 | 30..806 | 3720 | 98.6 | Plus |
| CG1304-RA | 893 | CG1304-RA | 36..753 | 49..766 | 2065 | 86.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20962711..20963487 | 806..30 | 3720 | 98.6 | Minus |
| X | 23542271 | X | 20964713..20965384 | 720..49 | 2010 | 87.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:31 has no hits.
FMO03887.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:46 Download gff for
FMO03887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser6-RA | 19..799 | 30..811 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:04 Download gff for
FMO03887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser6-RA | 15..795 | 30..811 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:58 Download gff for
FMO03887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser6-RA | 19..799 | 30..811 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:58 Download gff for
FMO03887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20962707..20963487 | 30..811 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:46 Download gff for
FMO03887.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20833734..20834514 | 30..811 | 98 | | Minus |
