FMO03889.5prime Sequence
644 bp (644 high quality bases) assembled on 2008-07-21
> FMO03889.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAAGGCA
GCGGGTAAGCTGAAATCGCTAAAGAAGACGGTGGAACGTGTGACGCACAC
GAGCAAACTGAAGACGAATATACCTGCGGGAATGGCTGCTGCAGGTCCGC
CATTGGGACCGATGTTGGGACAGAGAGCGATTAATATCGCCGCTTTCTGC
AAGGACTTTAATGCCAAGACCGCGGAAATGAAAGAGGGCGTACCGCTGCC
GTGCAGAATTTCCGTAAACAGCGATCGCAGCTACGACTTGGCCATCCACC
ATCCGCCGGCCACATTTTTCCTGAAGCAAGCGGCGGGCATACAAAGGGGC
ACCATGACTCCTGGCAAGGAGGTTGCCGGCATGATCACTCTCAAGCATTT
GTACGAGATTGCAGCTATTAAGATTCAGGACCCGCCCAATGTACTTCTTA
CCATGCAGCAAATGTGTGAGATGCTCATCAGCATTGCTCGGACCTGTGGC
ATCAAAGTGGTCAGGGAAATAGATCCGGCGGCCTATGGCGAGTTCCTGGA
GGAGCGCAAGTTAATTGTGGAACAGCAACGGCGCGAGTTGCAGGAGAAGC
GGGAAGCAAAGATGTTGCGCACGGGCGCAAGCTTTCTAGACCAT
FMO03889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL11-RA | 734 | CG3351-RA | 87..674 | 39..626 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14512115..14512403 | 170..458 | 1445 | 100 | Plus |
| 3R | 32079331 | 3R | 14512462..14512631 | 457..626 | 850 | 100 | Plus |
| 3R | 32079331 | 3R | 14511924..14512058 | 39..173 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:18 has no hits.
FMO03889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:02 Download gff for
FMO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL11-RA | 77..681 | 29..635 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:07 Download gff for
FMO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL11-RA | 47..651 | 29..635 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:23 Download gff for
FMO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL11-RA | 77..681 | 29..635 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:23 Download gff for
FMO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14511914..14512058 | 29..173 | 97 | -> | Plus |
| 3R | 14512119..14512403 | 174..458 | 100 | -> | Plus |
| 3R | 14512464..14512638 | 459..635 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:02 Download gff for
FMO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10337636..10337780 | 29..173 | 97 | -> | Plus |
| arm_3R | 10337841..10338125 | 174..458 | 100 | -> | Plus |
| arm_3R | 10338186..10338360 | 459..635 | 97 | | Plus |
