FMO03904.5prime Sequence
565 bp (565 high quality bases) assembled on 2008-07-21
> FMO03904.5prime
CTTCGTATAGCATAAAAAAACAAAGTTATCAATCGACATGACACATCTGA
CAAAAAATTTCGCACGTCCAGAAAAGAATGAGGAGGTTGTGACCTTCGGC
AGTCTGGATCCGTCGGTTCAAGAACTTCTGACAGCTGCTTTTCAAGTGCG
CCAGCGGGCATACGTTCCATATAGTGGCTTCAAAGTTGGGGCTGCTTTTC
GGGCCAAGGTCGATGGAAAGATCTTCACTGGCTGCAATGTGGAAAACGCC
GCCTTTACGCCGGGCTCTTGTGCCGAGAGAACGGCCATTGCTAAGGCCGT
AAACGAAGGAGCCACCGAATTTTTGGCAGGTGCTGTTTTGGCCTACGAAC
CTAATGTATTCACCACTCCTTGCGGCGTTTGTCGTCAGTTTATACGCGAG
TTTGCCAACGCGGATATACCCATATATGTGGCCCATGCGATCGATGCGAG
GATTGCTGAAAAGCATGAACTTTTGCAGAGTGACGATCCCGTCATGTGCA
CCTCAATCTTTAATCTGTTGCCGAGCAGTTTTCACACCTATCGAAAGGCA
AGCTTTCTAGACCAT
FMO03904.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8353-RB | 1011 | CG8353-RB | 374..883 | 38..547 | 2505 | 99.4 | Plus |
CG8353-RA | 751 | CG8353-RA | 114..623 | 38..547 | 2505 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8214671..8215111 | 107..547 | 2160 | 99.3 | Plus |
2L | 23513712 | 2L | 8214418..8214487 | 38..107 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:46 has no hits.
FMO03904.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:44 Download gff for
FMO03904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8353-RA | 111..626 | 32..551 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:21:51 Download gff for
FMO03904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8353-RA | 111..626 | 32..551 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:42 Download gff for
FMO03904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8353-RA | 111..626 | 32..551 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:42 Download gff for
FMO03904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8214414..8214487 | 32..107 | 94 | -> | Plus |
2L | 8214672..8215114 | 108..551 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:44 Download gff for
FMO03904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8214414..8214487 | 32..107 | 94 | -> | Plus |
arm_2L | 8214672..8215114 | 108..551 | 98 | | Plus |