FMO03905.5prime Sequence
790 bp (790 high quality bases) assembled on 2008-07-21
> FMO03905.5prime
GTATAGCATACCTAAAACGAAGTTATCAGTCGACATGAATAAAGCGGTGT
GCCTAGTAATCGTGATCCAAGCATTGCGGATGGTGCAGGCCGAGACCCCG
CCCTATATTAAACAATGTCATAGGAACGACCCGAAATTGGTGGACTGCTT
TATCGGAGCTATTGAACACCTAAAGCCATATTTGGCCAATGGCATTCCTG
ATATTCAGCTGCCCTCTGTGGAGCCCTTTAAGATGGACACCCTTGCCCTG
CAGTTAACAGAGGGTCCCCAGGGGTATAAGATCACGCTGAAGAACATGGA
GGCCTTCGGGGCCAGCAACTTCAAGGTGACATCCCTGAAACTGAGCGAAG
GAAGCGAGCCCTTCAAGGCGAAGATCGTGATGCCCAAGCTAAAGATTGAG
GCTAAATACACGAGCTCCGGGGTCCTGCTGATCCTGCCCGCCTCCGGAGG
TGGGGACTTCCATGCTAACTTCGAGGGTGTGAGTGCCGATCTCACAGGAA
AGACATCCATTCACGCCTTCAAGGGCGCTAACTACCTCCACATCGATGCT
CTCAGCTTGGTTCTGGATGTGAAGGATGTGAAAATGAGCATCTCAGGTGC
CTTCAACAACAATCGAATTCTGCTGGAGGCCACCAATCTGTTTCTGCGGG
AAAACTCTCAAGTCGTTTTGGAGGCTATGCAGGCTCAATTGCAGAAAAAA
TTGGCTAGCGAGTTCGGCAAACTCGCCAACCAGCTCCTGAAGAATGTTCC
TGTAGAGCAATTCTACGTGGACGCAAGCTTTCTAGACCAT
FMO03905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1124-RA | 1116 | CG1124-RA | 140..877 | 35..772 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4967618..4968035 | 206..623 | 2090 | 100 | Plus |
| 3R | 32079331 | 3R | 4968098..4968246 | 624..772 | 745 | 100 | Plus |
| 3R | 32079331 | 3R | 4967129..4967238 | 99..208 | 550 | 100 | Plus |
| 3R | 32079331 | 3R | 4965584..4965647 | 35..98 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:16 has no hits.
FMO03905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:15 Download gff for
FMO03905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1124-RA | 134..885 | 28..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:00 Download gff for
FMO03905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1124-RA | 132..883 | 28..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:33 Download gff for
FMO03905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1124-RA | 134..885 | 28..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:33 Download gff for
FMO03905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4967621..4968035 | 209..623 | 100 | -> | Plus |
| 3R | 4965578..4965647 | 28..98 | 97 | -> | Plus |
| 3R | 4967129..4967238 | 99..208 | 100 | -> | Plus |
| 3R | 4968098..4968254 | 624..781 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:15 Download gff for
FMO03905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 791300..791369 | 28..98 | 97 | -> | Plus |
| arm_3R | 792851..792960 | 99..208 | 100 | -> | Plus |
| arm_3R | 793343..793757 | 209..623 | 100 | -> | Plus |
| arm_3R | 793820..793976 | 624..781 | 97 | | Plus |
