FMO03911.5prime Sequence
490 bp (490 high quality bases) assembled on 2008-07-21
> FMO03911.5prime
TAGCATACCTTATACGAAGTTATCAGTCGACATGCAGTACATCTATGTGA
TTAGTGCGCTGATTTTGGCCATCGCCGTGCAGCAAGGATATGCCATCAAG
TGCTTTGTCTGCAACAGCCACAAAGACGCCAACTGTGCGCTGGACATACC
GCCGGACAATCTGCTGAAGGACTGCGATGAGCAGTACTCGTCCCGTGGCA
AGGGAATACCCACATACTGCCGCAAGATTACGCAGATCATCGAGTTCTCG
GTGAACAGCCTGCCCCCGGATAGCCGTGTGATTAGGACCTGTGCCTATCA
GAATCAGACCTCCACCAACTATTGCTATCAGCGTGCCGGTTTTGGTGGTC
GGCAGGTGGTCTGCTCCTGCGATACGGATAACTGCAACGGAGCCGGAGCG
ATGGGCGCATCGGCGTTGGGCGTGGCAGCCATGGTGGGCCTCCTGCTGAG
CGCCCGTCAGTATCTGCAGCGTGCAAGCTTTCTAGACCAT
FMO03911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7781-RB | 1981 | CG7781-RB | 397..837 | 32..472 | 2205 | 100 | Plus |
| CG7781-RA | 1834 | CG7781-RA | 250..690 | 32..472 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8322491..8322702 | 472..261 | 1060 | 100 | Minus |
| 2L | 23513712 | 2L | 8322774..8322949 | 260..85 | 880 | 100 | Minus |
| 2L | 23513712 | 2L | 8324958..8325013 | 87..32 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:56:18 has no hits.
FMO03911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:50 Download gff for
FMO03911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7781-RA | 250..694 | 32..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:13 Download gff for
FMO03911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7781-RA | 287..731 | 32..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:48 Download gff for
FMO03911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7781-RA | 250..694 | 32..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:48 Download gff for
FMO03911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8322487..8322702 | 261..477 | 99 | <- | Minus |
| 2L | 8322774..8322947 | 87..260 | 100 | <- | Minus |
| 2L | 8324959..8325013 | 32..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:50 Download gff for
FMO03911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8324959..8325013 | 32..86 | 100 | | Minus |
| arm_2L | 8322487..8322702 | 261..477 | 99 | <- | Minus |
| arm_2L | 8322774..8322947 | 87..260 | 100 | <- | Minus |
