Clone FMO03914 Report

Search the DGRC for FMO03914

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:39
Well:14
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCpr47Eb-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03914.5prime Sequence

694 bp (694 high quality bases) assembled on 2008-07-21

> FMO03914.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCAAGATCGCCA
TCTGCTTGTTGGCCCTGGTCGGCGGATCTCTGGCTGCCAGCATTGGCCAG
GTTGACAGCACCACCGAGAAGCGTGAGATTGTGCCTCTGCTGAGGTTTGA
GACGAACAAGAACCCCGATGGCTCCTTCCACTTCAGCTACGAGGGCGGTG
ACCAGTCCGTGCGCCAGGAGCAGGGAGTGATCGAGAACGCCGGCACCGAG
GACGAGGCCTTGGAGGTGTCCGGTATGTACAGCTACATCGACGCCGATGG
CAACACCGTGGAGGTGCACTACACCGCCGGAAAGAACGGATTCGTGCCCA
TTGGCACCATCATTCCCAAGGAGATCACCGAGTTGGCCAAGTCAGCTGCC
CTTCTGCCCAAGGTTTCCGAGGATGAGCAGAAGTATCGCAAGGCCCGCTC
CCAGGAACTGGACAATAAGGAAGTTGCTGTAGAGAAGGAAGCCGCCCCAG
TGGAGAAGGAGGAGCCTGTGGTTGCCAAGGAATCGGTTGTGGTGGAGAAA
TCCGAGCCCCTGCCCGCCGAGTCCCAGGTGGCGCCTGTCCAGGTGGTCCT
CGATGCCGCGCCCCAAGCCGAGGTCAAGACCGCCATCGAGGCCGAGACCG
AGAAGAAGGTTGAGACCAAGACTGCCGCAAGCTTTCTAGACCAT

FMO03914.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr47Eb-RA 817 CG13224-RA 75..720 31..676 3215 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11255241..11255886 31..676 3215 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:03:21 has no hits.

FMO03914.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:40 Download gff for FMO03914.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Eb-RA 72..734 27..690 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:46 Download gff for FMO03914.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Eb-RA 70..732 27..690 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:54 Download gff for FMO03914.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Eb-RA 72..734 27..690 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:54 Download gff for FMO03914.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11255242..11255900 32..690 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:40 Download gff for FMO03914.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7142747..7143405 32..690 99   Plus