Clone FMO03917 Report

Search the DGRC for FMO03917

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:39
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptmRpL42-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03917.5prime Sequence

426 bp (426 high quality bases) assembled on 2008-07-21

> FMO03917.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCAGCGGCACG
TTTATACGGAGGATTTCGTTTATTTTCCTCGAGTGCCGTGCAGCGCAATG
CCGTCGGTGGCAAGAGCCTGGTGGAGGCCGTGGCAGTGACCAAAAATGGT
CGCACCATTGTGGCCTGGCATCCGGACACACCAGTTCCCTACGAGAACAC
CCTGCCGCTGCCAGAGATCAGCGAGATTCAGAGCTCGGCGGTGGTTAAGG
AATCGGCTCTGAAGACGGCGATGCGTGCCTTTAAAAGCAAACATCCAGAA
GTGGCTCGCCAGGAGCTGATGCAGCTGACCCACACGACTAAACACCGCTG
GTTTCCACGCGCCCGCGACAGGAAGGCCAAGCAAACGCCGATGGACCGGC
CGTACCTAGCAAGCTTTCTAGACCAT

FMO03917.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL42-RB 460 CG12921-RB 32..403 37..408 1860 100 Plus
mRpL42-RA 593 CG12921-RA 165..536 37..408 1860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10066814..10067185 37..408 1860 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:00:31 has no hits.

FMO03917.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:36 Download gff for FMO03917.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL42-RA 159..544 31..418 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:21:53 Download gff for FMO03917.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL42-RA 160..545 31..418 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:33 Download gff for FMO03917.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL42-RA 159..544 31..418 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:33 Download gff for FMO03917.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10066814..10067193 37..418 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:36 Download gff for FMO03917.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5954319..5954698 37..418 98   Plus