FMO03918.5prime Sequence
1107 bp (1058 high quality bases) assembled on 2008-07-21
> FMO03918.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTCCGTGCATT
GTCAACTGTGGATGGGAAGCCTGGAGTCCTACATGACGGAGAACTTCATA
ATCGCCGCTTTCCGGAAGATGGGCGAAGATCCCACCACGGTGCGCCTGAT
GCGCAACAAGTACACGGGCGAACCAGCCGGCTACTGCTTCGTCAACTTCA
TATCCGATGACCATGCGCTGGACGCGATGCACAAGCTAAACGGTAAGCCC
ATTCCGGGCACCAATCCCATTGTGCGATTCCGTCTTAACTCGGCCAGCAA
CTCGTACAAGCTGCCCGGGAATGAACGCGAATTTAGCGTCTGGGTGGGCG
ACCTCAGCTCGGACGTGGACGACTATCAGCTGTACAAGGTGTTCTCCAGC
AAGTTCACATCGATCAAAACCGCCAAGGTGATCTTGGACAGCCTGGGGTT
TTCCAAGGGTTACGGCTTTGTGCGATTTGGCATCGAGGATGAGCAGAAAT
CAGCGCTGTACGACATGAACGGGTACATCGGATTGGGTACCAAGCCCATA
AAGATTTGCAATGCCGTGCCCAAACCCAAATCCGAGTTGGGTGGTGCTGT
GGGCGAAGGCAACACAAACTATGGATATGGAAGCGGTATGACTGCAGCAG
GTGGCACCGACTACTCGCAGTACTACGACCCCACCAGCACCTATTGGCAG
GGATACCAGGCCTGGCAAGGTTACTACGAGCAGGCCGGTGCTTCGATCAC
AGATGCGGCTGCATACTACCAGCAGGCCATGTCGCAGTCGCACTCTAATC
CGCAGACTCTGGCCCAGCACGCCGAGGCCTGGAGCGCACAACGCAGCGCC
CAGTACGAGCAGCAGCAGCAGCAGCAGACCGCTTCCGCCGCCAATGGATC
TGAGGATGAGAACGGACTGGTGGAGCACAAGTTCGTCCTGGATGTGGACA
AACTGACCGAGAGGCCATTGATGCCGACCGCCGTCTGTACGATGCTCTGG
AAAGCTCTAAGTGGCTGCCCATTGAGCAGCTGGAAGTCTTGCAAGCTTTT
AAGACAATCGTTGGCCGCCGGACCCAGGTAGGGGTCATAAATCAATCATA
TCAATAT
FMO03918.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15440-RA | 1224 | CG15440-RA | 92..1098 | 35..1040 | 4965 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4453295..4454265 | 1040..71 | 4760 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:31 has no hits.
FMO03918.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:13 Download gff for
FMO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15440-RA | 92..1098 | 35..1040 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:03 Download gff for
FMO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15440-RA | 96..1102 | 35..1040 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:57 Download gff for
FMO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15440-RA | 92..1098 | 35..1040 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:57 Download gff for
FMO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4453287..4454265 | 71..1047 | 99 | <- | Minus |
| 2L | 4454327..4454362 | 35..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:13 Download gff for
FMO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4453287..4454265 | 71..1047 | 99 | <- | Minus |
| arm_2L | 4454327..4454362 | 35..70 | 100 | | Minus |
