FMO03920.5prime Sequence
719 bp (719 high quality bases) assembled on 2008-07-21
> FMO03920.5prime
CGTATAGCATACATAATACGAAGTTATCAGTCGACATGTCGCCGCCCGTG
CTGTACTACCTGCCGCCCAGTCCGCCCTGCCGCAGCATTCTGCTGCTGGC
CAAGATGCTGGACATCGACTTCGAGCTGAAGATCGTCAACATTTTGGAGG
GGGAGCAGCTGAAACCGGACTTTGTGGCCATGAATCCGCAGCACTGTGTG
CCGACTATGAACGACGAGGGTCTGGTTTTGTGGGAAAGTCGTGCCATACT
CTCCTATCTGGTGGCTGCCTACGGCAAGAGTGACCAACTGTATCCCACGG
ACATAAGGGTGAGGGCTTTGGTGGACCAACGCCTCCAGTTCGATTTGGGC
ACCCTATACATGCGACTCACGGACTACTATTTCCCCACAATGTTTATTGG
TGCGCCCCTGGACGAAGGAAAGCGTGCCAAATTGGCGGAGGCTGTGGGCT
GGCTAAACACAATCTTGGAGGGCAGACAGTTTTCCGCCGCCGATCACTTC
ACCATCGCGGATCTCACGCTTTTGGTGACCGTTTCCCAGCTGGAGGCCTT
CGAATTTGAACTTCGACCCTATAAACATATCCGCCAATGGCTCGATCGCT
GCAAGGATCACATGGCACCGTTTGACTACGAGGAACTCAATGCCAACAAG
GCCAATATGTTGGCCGATATGTTCAAGGCCAAGATGAATCAATCGGCGGG
CGCAAGCTTTCTAGACCAT
FMO03920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD11-RB | 839 | CG17639-RB | 81..746 | 36..701 | 3330 | 100 | Plus |
| GstD11-RA | 1051 | CG17639-RA | 293..958 | 36..701 | 3330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12385211..12385531 | 381..701 | 1605 | 100 | Plus |
| 3R | 32079331 | 3R | 12384410..12384612 | 36..238 | 1015 | 100 | Plus |
| 3R | 32079331 | 3R | 12384678..12384821 | 237..380 | 720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:32 has no hits.
FMO03920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:25 Download gff for
FMO03920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD11-RA | 293..961 | 36..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:22 Download gff for
FMO03920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17639-RB | 64..732 | 36..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:43 Download gff for
FMO03920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD11-RA | 293..961 | 36..705 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:43 Download gff for
FMO03920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12385211..12385534 | 381..705 | 99 | | Plus |
| 3R | 12384400..12384612 | 25..238 | 96 | -> | Plus |
| 3R | 12384680..12384821 | 239..380 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:25 Download gff for
FMO03920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8210122..8210334 | 25..238 | 96 | -> | Plus |
| arm_3R | 8210402..8210543 | 239..380 | 100 | -> | Plus |
| arm_3R | 8210933..8211256 | 381..705 | 99 | | Plus |
