FMO03923.5prime Sequence
497 bp (497 high quality bases) assembled on 2008-07-21
> FMO03923.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAATCACAACC
TACGTCTATGCCATGTGCCTTGTTTTGGCCGCCAATTTGTTAACAGTGAA
TGCCATTCGGTGCCATCAGTGTAATTCGCATGACAACGAGGATTGCGGTG
GCCTGGTGGTGAACACTCCTCGTGCCCAGAGGGACAACCAGTACCTGACG
GACTGCGTCCCGCCCAGCGGTGAGGTGGCCTTCTGCCGCAAGACGGTGAT
CAATTTCGAGCAGAACGACGAGCGCAGAATCGAGAGAAGCTGTGGTTTCA
TTCCGGAGAAGATCCAAAACGCTTGCTTCACCGCCGACAACGAGGGCTAC
AAGCAGATCATTTGCACCTGTCCCGACGAGGGATGCAATGGAGCCAGCTC
CCTGCTGGGTGTCCGCCAGTTGGGCTACAGTCTGGTTGGATCTGTCGTCA
GTCTGGCACTGGCCAGCATGCTCAGGCATGCAAGCTTTCTAGACCAT
FMO03923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14275-RB | 848 | CG14275-RB | 184..627 | 36..479 | 2220 | 100 | Plus |
| CG14275-RA | 849 | CG14275-RA | 185..628 | 36..479 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8332305..8332690 | 94..479 | 1930 | 100 | Plus |
| 2L | 23513712 | 2L | 8329704..8329764 | 36..96 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:55 has no hits.
FMO03923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:42 Download gff for
FMO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14275-RA | 179..628 | 28..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:15 Download gff for
FMO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14275-RA | 177..626 | 28..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:58 Download gff for
FMO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14275-RA | 179..628 | 28..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:58 Download gff for
FMO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8329698..8329764 | 28..96 | 94 | -> | Plus |
| 2L | 8332308..8332690 | 97..479 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:42 Download gff for
FMO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8329698..8329764 | 28..96 | 94 | -> | Plus |
| arm_2L | 8332308..8332690 | 97..479 | 100 | | Plus |
