FMO03931.5prime Sequence
1241 bp (131 high quality bases) assembled on 2008-07-21
> FMO03931.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAATCCACATGAAGTTCTGT
GCTGCCGTGGCTCTGCTACTGATCGCCGGCATTGTGGCCAGCGGCGATGC
CCTGCCCGCCAGGAAAAGAATGGTCTACCTCCAGCAGCCCGCAGCAGCAG
AGTGGTACGGATCCGCACCCCATCATCGCTTCATGGATATGCAGGATGTC
CAGCCCGGCCGCCCCCACGCCCGTTCCACCCAGGCAGCCAGTGCCCTCGT
GGCCGGAGAGACCGTAGCCACCGGAACCTACCTGAAGGATTGCAATCACG
CAGAGTCTGATACTAGCGCCGAGGGAGTCCCAGCTGACGATGTCCTCGCA
GCCGCCGGAGCCCACGGCGCAACCTCCGTGGCCGAGGCTTATCCCGACCA
AGCGCCTTTTGTACAGGTGGCCACCAATTCCGACGTATCACCCCAAGCCG
AGTCAGAGGCTGAACCCGAGCCCGAGGCCGCAGACGACGCCGCTAAGGTT
CCACGAGACTTCAACTTCGCCGCCGAGGAAGCCTCCGTCGGCTCTGCTGC
TGAGGAGGAATCAGATCACCTGACCGTTGCCGAGGCCGAGCTTCCAGCCC
CCGGTCCCATTGCTCCAGTGGCCGCCGTGGTGCCAGCGAACCGCTACCTG
CCCGCCAAGAAAAAGGTGATCGTCGAGCTGGATCAGGAGGAGGAGGAGCC
CCAGGCCGCCGCCAGTGAAGACGATGAGGAAGTATAGAACGCTGTGGCCG
ACGACGTTGAGGAAGGACGAGGAGGAGCTGTCCGTGCCCGTAAACCCATT
AACCCTGTGCGCGTGCCCACGCCCGTCGTCCCGCAAACAAGAAGCCTGTG
AAGGCTGCTTCTCCTGCCGGCAGCCCTCCAAGAAGCCCGCCGCCCCTCTG
CCCGCTGGCACCTATTTCCCCATCTATTTCGGATGACCCAGAGGTCGGCG
ACAATTGCCGATTGTCAACTCTATCAGCACCGGCGAGGACAGAATCTGCT
ACCAGCCATCGCCAATCGCATACGGCTCTCTGAAGTCTGCGATCGTCGAG
CCCGCCCCTAATGCCATGACTAGTTTCAGCTCCCGCTAGCTTACTAAACC
AGTCGAATCGGGACGCGCGGGACACAGGTAAGGTGATCTAATCGTGATCC
TAAATCTAACTCGATACTCCACTTAGCTAGCAATCTGCCTGACATAGGCC
TTGGAATTGCTCCGACTAATAACATACGCCTCTTGTGGGGG
FMO03931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11370-RA | 1323 | CG11370-RA | 149..1167 | 37..1058 | 4330 | 95.5 | Plus |
| CG11370-RB | 1308 | CG11370-RB | 149..1152 | 37..1058 | 4095 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22712737..22713482 | 288..1037 | 2860 | 95.1 | Plus |
| 3L | 28110227 | 3L | 22712502..22712672 | 118..288 | 795 | 97.7 | Plus |
| 3L | 28110227 | 3L | 22712303..22712384 | 37..118 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:51 has no hits.
FMO03931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:16 Download gff for
FMO03931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11370-RA | 134..1181 | 21..1075 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:03 Download gff for
FMO03931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11370-RA | 132..1179 | 21..1075 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:01 Download gff for
FMO03931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11370-RA | 134..1181 | 21..1075 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:01 Download gff for
FMO03931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22712288..22712383 | 21..117 | 94 | -> | Plus |
| 3L | 22712502..22712672 | 118..288 | 97 | -> | Plus |
| 3L | 22712738..22713518 | 289..1075 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:16 Download gff for
FMO03931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22705388..22705483 | 21..117 | 94 | -> | Plus |
| arm_3L | 22705602..22705772 | 118..288 | 97 | -> | Plus |
| arm_3L | 22705838..22706618 | 289..1075 | 94 | | Plus |
